G543328


Basic Information

Item Value
gene id G543328
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 73022347 ~ 73022871 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU615266
TTTCACTCCTCAGGCACTAAAACCATGCCCCTGCCCAACACAGATAGTGATACACCAAGATATACTGATATAAAATCAATAAGTGTGACACCTTCATTACCTGTTATTCTTTTAGCAGAATAAAGCTAGCCTCAGTAATGCATGATAAATCTCCAGAAAAAAAGATCACAGAACAGCTCACCCCTTAATAATGCTTCTATTTATAGGCTGCTGCTTTCAAGAAACTTTAGGAACCATATTGGTAATATGATCTTAGACAATGTTTTCTTTGATTACTGATGGCCAAAATGTAAAGACATCTAAACCAGAGGCTATCAAATATTTCCAATGATTAATGCTGAATTAAAGATGAATATCTTTTGAAGTCACATAAGCAGAGACTAGTCTAATCATATAAAAAATACCTAAGGTGGGGCAACTCATGACATAGAACAAAAGTTGAAGGTGATGTTGAAGTGAATCATCTTCTGGCAGGTGTATGGTTCCATCTGGATGGAGAGTAAGTACAGCTTCCAGGTCCTGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU615266 True 525 lncRNA 0.37 1 73022347 73022871

Neighbor

gene id symbol gene type direction distance location
LOC110526540 LOC106587507 coding downstream 14428 73002145 ~ 73007919 (-)
LOC110526538 LOC106587508 coding downstream 88744 72907574 ~ 72933603 (-)
LOC110526535 NA coding downstream 185100 72833270 ~ 72837247 (-)
rpb10 NA coding downstream 190469 72830481 ~ 72831878 (-)
LOC110526534 sdhaf2 coding downstream 195660 72823238 ~ 72826687 (-)
LOC118964932 NA coding upstream 244251 73267122 ~ 73267581 (-)
LOC100135817 LOC100135817 coding upstream 577136 73600007 ~ 73604526 (-)
pde3b pde3b coding upstream 612079 73634950 ~ 73725162 (-)
ric3a LOC106587537 coding upstream 869398 73892269 ~ 73897040 (-)
LOC110526553 rbtn1 coding upstream 914493 73937364 ~ 73961097 (-)
G543326 NA non-coding downstream 646 73021280 ~ 73021701 (-)
G543318 NA non-coding downstream 1550 73020198 ~ 73020797 (-)
G543238 ext2 non-coding downstream 127400 72888515 ~ 72894947 (-)
G543240 NA non-coding downstream 134414 72887391 ~ 72887933 (-)
G543251 ext2 non-coding downstream 136694 72884417 ~ 72885653 (-)
G543329 NA non-coding upstream 455 73023326 ~ 73023551 (-)
G543336 NA non-coding upstream 11054 73033925 ~ 73034130 (-)
G543339 NA non-coding upstream 14520 73037391 ~ 73037670 (-)
G543523 NA non-coding upstream 197211 73220082 ~ 73253643 (-)
G543555 NA non-coding upstream 243558 73266429 ~ 73268167 (-)
G543313 LOC106587506 other downstream 2347 72997528 ~ 73020000 (-)
G543224 LOC106587514 other downstream 212175 72809777 ~ 72810172 (-)
G543091 NA other downstream 300529 72600275 ~ 72721818 (-)
G543092 NA other downstream 355634 72659456 ~ 72666713 (-)
G543334 NA other upstream 5902 73028773 ~ 73029102 (-)
G543823 NA other upstream 539488 73562359 ~ 73562863 (-)
sinhcafl fa60a other upstream 1246372 74269202 ~ 74274416 (-)
dennd5a LOC106587543 other upstream 1258138 74274850 ~ 74333920 (-)
G544882 LOC106562356 other upstream 1336390 74359261 ~ 74360422 (-)

Expression


Co-expression Network