G543569


Basic Information

Item Value
gene id G543569
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 73299659 ~ 73300568 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU615548
gtattgtctttactgtattgtcttgtctctactgtattgtcttgtctctactgtattgtcttgtctctagtgcattgtcttgtctctactgtattgtcttgtctctactgtattgtctttactgtattgtcttgtctctactgtattgtcttgtctctagtgcattgtcttgtctctactgtattgtcttgtctctaaTGCActgtcttgtctctactgtattgtcttgtctctagtgcattgtcttgtctctactgtattgtcttgtctctagtgcattgtcttgtctctactgtattgtcttgtctctagtgcattgtcttgtctctactgtattgtcttgtctctagtgcattgtcttgtctctactgtattgtcttgtctctatGGAACAGGTTCTAATCTAAATGCTTAAACTTAATGTTTCTTACATAAAAAGATTTTCAGTAAGCTGATTTGGACAGTGAATCTTGTTAAAACAATTACAATcagccaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU615548 True 498 lncRNA 0.36 2 73299659 73300568

Neighbor

gene id symbol gene type direction distance location
LOC118964932 NA coding downstream 32078 73267122 ~ 73267581 (-)
LOC110526540 LOC106587507 coding downstream 291740 73002145 ~ 73007919 (-)
LOC110526538 LOC106587508 coding downstream 366056 72907574 ~ 72933603 (-)
LOC110526535 NA coding downstream 462412 72833270 ~ 72837247 (-)
rpb10 NA coding downstream 467781 72830481 ~ 72831878 (-)
LOC100135817 LOC100135817 coding upstream 299439 73600007 ~ 73604526 (-)
pde3b pde3b coding upstream 334382 73634950 ~ 73725162 (-)
ric3a LOC106587537 coding upstream 591701 73892269 ~ 73897040 (-)
LOC110526553 rbtn1 coding upstream 636796 73937364 ~ 73961097 (-)
stk33 LOC106587539 coding upstream 788199 74088767 ~ 74127787 (-)
G543555 NA non-coding downstream 31492 73266429 ~ 73268167 (-)
G543523 NA non-coding downstream 46016 73220082 ~ 73253643 (-)
G543339 NA non-coding downstream 261989 73037391 ~ 73037670 (-)
G543336 NA non-coding downstream 265529 73033925 ~ 73034130 (-)
G543329 NA non-coding downstream 276108 73023326 ~ 73023551 (-)
G543606 NA non-coding upstream 66252 73366820 ~ 73367086 (-)
G543621 NA non-coding upstream 87385 73387953 ~ 73392232 (-)
G543674 NA non-coding upstream 129037 73429605 ~ 73429894 (-)
G543687 NA non-coding upstream 140242 73440810 ~ 73441046 (-)
G543695 NA non-coding upstream 146161 73446729 ~ 73446947 (-)
G543334 NA other downstream 270557 73028773 ~ 73029102 (-)
G543313 LOC106587506 other downstream 279659 72997528 ~ 73020000 (-)
G543224 LOC106587514 other downstream 489487 72809777 ~ 72810172 (-)
G543092 NA other downstream 632946 72659456 ~ 72666713 (-)
G543823 NA other upstream 261791 73562359 ~ 73562863 (-)
sinhcafl fa60a other upstream 968675 74269202 ~ 74274416 (-)
dennd5a LOC106587543 other upstream 980441 74274850 ~ 74333920 (-)
G544882 LOC106562356 other upstream 1058693 74359261 ~ 74360422 (-)
G544923 NA other upstream 1112737 74413305 ~ 74433292 (-)

Expression


Co-expression Network