Item | Value |
---|---|
gene id | G543656 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 73416885 ~ 73417159 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU615637 | True | 275 | lncRNA | 0.45 | 1 | 73416885 | 73417159 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC100136290 | sox6 | coding | upstream | 24636 | 73190979 ~ 73392251 (+) |
LOC110526543 | LOC106587517 | coding | upstream | 234143 | 73037953 ~ 73182742 (+) |
LOC118965119 | NA | coding | upstream | 397185 | 73019572 ~ 73019700 (+) |
LOC118965096 | NA | coding | upstream | 397628 | 73019055 ~ 73019257 (+) |
LOC118965112 | NA | coding | upstream | 399346 | 73017408 ~ 73017539 (+) |
LOC110526546 | LOC106587531 | coding | downstream | 199669 | 73616828 ~ 73634948 (+) |
LOC110526547 | LOC106587501 | coding | downstream | 308968 | 73726127 ~ 73731840 (+) |
copb1 | copb | coding | downstream | 316638 | 73733797 ~ 73741617 (+) |
rras2 | rras2 | coding | downstream | 327740 | 73744899 ~ 73789243 (+) |
tub | LOC106587536 | coding | downstream | 376476 | 73793635 ~ 73891981 (+) |
G543650 | NA | non-coding | upstream | 3954 | 73412713 ~ 73412931 (+) |
G543435 | NA | non-coding | upstream | 163260 | 73220031 ~ 73253625 (+) |
G543426 | NA | non-coding | upstream | 216875 | 73196436 ~ 73200010 (+) |
G543414 | NA | non-coding | upstream | 232981 | 73183646 ~ 73183904 (+) |
G543671 | NA | non-coding | downstream | 11286 | 73428445 ~ 73428654 (+) |
G543696 | NA | non-coding | downstream | 30036 | 73447195 ~ 73447462 (+) |
G543704 | NA | non-coding | downstream | 34638 | 73451797 ~ 73452020 (+) |
G543713 | NA | non-coding | downstream | 38792 | 73455951 ~ 73456158 (+) |
G543728 | NA | non-coding | downstream | 54289 | 73471448 ~ 73471777 (+) |
G542890 | NA | other | upstream | 650034 | 72765681 ~ 72766851 (+) |
saa | saa | other | upstream | 750013 | 72665460 ~ 72666872 (+) |
G542100 | LOC106587475 | other | upstream | 1264491 | 72151020 ~ 72152394 (+) |
G544565 | NA | other | downstream | 870619 | 74287778 ~ 74288138 (+) |
G545485 | NA | other | downstream | 1820641 | 75237800 ~ 75238164 (+) |
G545601 | NA | other | downstream | 2004702 | 75421861 ~ 75422752 (+) |
G546464 | LOC106562315 | other | downstream | 2511069 | 75928228 ~ 75970674 (+) |
LOC110526968 | fto | other | downstream | 3470273 | 76827001 ~ 77038395 (+) |