Gene
RNA
| Item | Value |
|---|---|
| gene id | G543671 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 73428445 ~ 73428654 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU615652 | True | 210 | lncRNA | 0.49 | 1 | 73428445 | 73428654 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136290 | sox6 | coding | upstream | 36196 | 73190979 ~ 73392251 (+) |
| LOC110526543 | LOC106587517 | coding | upstream | 245703 | 73037953 ~ 73182742 (+) |
| LOC118965119 | NA | coding | upstream | 408745 | 73019572 ~ 73019700 (+) |
| LOC118965096 | NA | coding | upstream | 409188 | 73019055 ~ 73019257 (+) |
| LOC118965112 | NA | coding | upstream | 410906 | 73017408 ~ 73017539 (+) |
| LOC110526546 | LOC106587531 | coding | downstream | 188174 | 73616828 ~ 73634948 (+) |
| LOC110526547 | LOC106587501 | coding | downstream | 297473 | 73726127 ~ 73731840 (+) |
| copb1 | copb | coding | downstream | 305143 | 73733797 ~ 73741617 (+) |
| rras2 | rras2 | coding | downstream | 316245 | 73744899 ~ 73789243 (+) |
| tub | LOC106587536 | coding | downstream | 364981 | 73793635 ~ 73891981 (+) |
| G543656 | NA | non-coding | upstream | 11286 | 73416885 ~ 73417159 (+) |
| G543650 | NA | non-coding | upstream | 15514 | 73412713 ~ 73412931 (+) |
| G543435 | NA | non-coding | upstream | 174820 | 73220031 ~ 73253625 (+) |
| G543426 | NA | non-coding | upstream | 228435 | 73196436 ~ 73200010 (+) |
| G543696 | NA | non-coding | downstream | 18541 | 73447195 ~ 73447462 (+) |
| G543704 | NA | non-coding | downstream | 23143 | 73451797 ~ 73452020 (+) |
| G543713 | NA | non-coding | downstream | 27297 | 73455951 ~ 73456158 (+) |
| G543728 | NA | non-coding | downstream | 42794 | 73471448 ~ 73471777 (+) |
| G543736 | NA | non-coding | downstream | 51260 | 73479914 ~ 73480138 (+) |
| G542890 | NA | other | upstream | 661594 | 72765681 ~ 72766851 (+) |
| saa | saa | other | upstream | 761573 | 72665460 ~ 72666872 (+) |
| G542100 | LOC106587475 | other | upstream | 1276051 | 72151020 ~ 72152394 (+) |
| G544565 | NA | other | downstream | 859124 | 74287778 ~ 74288138 (+) |
| G545485 | NA | other | downstream | 1809146 | 75237800 ~ 75238164 (+) |
| G545601 | NA | other | downstream | 1993207 | 75421861 ~ 75422752 (+) |
| G546464 | LOC106562315 | other | downstream | 2499574 | 75928228 ~ 75970674 (+) |
| LOC110526968 | fto | other | downstream | 3458778 | 76827001 ~ 77038395 (+) |
