Gene
RNA
| Item | Value |
|---|---|
| gene id | G543783 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 73510642 ~ 73510940 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU615764 | True | 299 | lncRNA | 0.42 | 1 | 73510642 | 73510940 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136290 | sox6 | coding | upstream | 118393 | 73190979 ~ 73392251 (+) |
| LOC110526543 | LOC106587517 | coding | upstream | 327900 | 73037953 ~ 73182742 (+) |
| LOC118965119 | NA | coding | upstream | 490942 | 73019572 ~ 73019700 (+) |
| LOC118965096 | NA | coding | upstream | 491385 | 73019055 ~ 73019257 (+) |
| LOC118965112 | NA | coding | upstream | 493103 | 73017408 ~ 73017539 (+) |
| LOC110526546 | LOC106587531 | coding | downstream | 105888 | 73616828 ~ 73634948 (+) |
| LOC110526547 | LOC106587501 | coding | downstream | 215187 | 73726127 ~ 73731840 (+) |
| copb1 | copb | coding | downstream | 222857 | 73733797 ~ 73741617 (+) |
| rras2 | rras2 | coding | downstream | 233959 | 73744899 ~ 73789243 (+) |
| tub | LOC106587536 | coding | downstream | 282695 | 73793635 ~ 73891981 (+) |
| G543779 | NA | non-coding | upstream | 5249 | 73505132 ~ 73505393 (+) |
| G543773 | NA | non-coding | upstream | 10462 | 73499965 ~ 73500180 (+) |
| G543746 | NA | non-coding | upstream | 25737 | 73484551 ~ 73484905 (+) |
| G543736 | NA | non-coding | upstream | 30504 | 73479914 ~ 73480138 (+) |
| G543728 | NA | non-coding | upstream | 38865 | 73471448 ~ 73471777 (+) |
| G543810 | NA | non-coding | downstream | 29598 | 73540538 ~ 73540746 (+) |
| G543818 | NA | non-coding | downstream | 36261 | 73547201 ~ 73547743 (+) |
| G543820 | NA | non-coding | downstream | 36936 | 73547876 ~ 73548204 (+) |
| G543822 | NA | non-coding | downstream | 51427 | 73562367 ~ 73562593 (+) |
| G543890 | NA | non-coding | downstream | 124026 | 73634966 ~ 73636604 (+) |
| G542890 | NA | other | upstream | 743791 | 72765681 ~ 72766851 (+) |
| saa | saa | other | upstream | 843770 | 72665460 ~ 72666872 (+) |
| G542100 | LOC106587475 | other | upstream | 1358248 | 72151020 ~ 72152394 (+) |
| G544565 | NA | other | downstream | 776838 | 74287778 ~ 74288138 (+) |
| G545485 | NA | other | downstream | 1726860 | 75237800 ~ 75238164 (+) |
| G545601 | NA | other | downstream | 1910921 | 75421861 ~ 75422752 (+) |
| G546464 | LOC106562315 | other | downstream | 2417288 | 75928228 ~ 75970674 (+) |
| LOC110526968 | fto | other | downstream | 3376492 | 76827001 ~ 77038395 (+) |
