Gene
RNA
| Item | Value |
|---|---|
| gene id | G543978 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 73725207 ~ 73725676 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU615963 | True | 470 | lncRNA | 0.35 | 1 | 73725207 | 73725676 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526546 | LOC106587531 | coding | upstream | 90259 | 73616828 ~ 73634948 (+) |
| LOC100136290 | sox6 | coding | upstream | 332958 | 73190979 ~ 73392251 (+) |
| LOC110526543 | LOC106587517 | coding | upstream | 542465 | 73037953 ~ 73182742 (+) |
| LOC118965119 | NA | coding | upstream | 705507 | 73019572 ~ 73019700 (+) |
| LOC118965096 | NA | coding | upstream | 705950 | 73019055 ~ 73019257 (+) |
| LOC110526547 | LOC106587501 | coding | downstream | 451 | 73726127 ~ 73731840 (+) |
| copb1 | copb | coding | downstream | 8121 | 73733797 ~ 73741617 (+) |
| rras2 | rras2 | coding | downstream | 19223 | 73744899 ~ 73789243 (+) |
| tub | LOC106587536 | coding | downstream | 67959 | 73793635 ~ 73891981 (+) |
| LOC118965098 | NA | coding | downstream | 583364 | 74309040 ~ 74309094 (+) |
| G543890 | NA | non-coding | upstream | 88603 | 73634966 ~ 73636604 (+) |
| G543822 | NA | non-coding | upstream | 162614 | 73562367 ~ 73562593 (+) |
| G543820 | NA | non-coding | upstream | 177003 | 73547876 ~ 73548204 (+) |
| G543818 | NA | non-coding | upstream | 177464 | 73547201 ~ 73547743 (+) |
| G543810 | NA | non-coding | upstream | 184461 | 73540538 ~ 73540746 (+) |
| G543997 | NA | non-coding | downstream | 45494 | 73771170 ~ 73771497 (+) |
| G544292 | NA | non-coding | downstream | 210051 | 73935727 ~ 73935939 (+) |
| G544407 | NA | non-coding | downstream | 309804 | 74035480 ~ 74035734 (+) |
| G544423 | NA | non-coding | downstream | 335189 | 74060865 ~ 74061122 (+) |
| G542890 | NA | other | upstream | 958356 | 72765681 ~ 72766851 (+) |
| saa | saa | other | upstream | 1058335 | 72665460 ~ 72666872 (+) |
| G542100 | LOC106587475 | other | upstream | 1572813 | 72151020 ~ 72152394 (+) |
| G544565 | NA | other | downstream | 562102 | 74287778 ~ 74288138 (+) |
| G545485 | NA | other | downstream | 1512124 | 75237800 ~ 75238164 (+) |
| G545601 | NA | other | downstream | 1696185 | 75421861 ~ 75422752 (+) |
| G546464 | LOC106562315 | other | downstream | 2202552 | 75928228 ~ 75970674 (+) |
| LOC110526968 | fto | other | downstream | 3161756 | 76827001 ~ 77038395 (+) |
