Gene
RNA
| Item | Value |
|---|---|
| gene id | G544423 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 74060865 ~ 74061122 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU616456 | True | 258 | lncRNA | 0.53 | 1 | 74060865 | 74061122 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tub | LOC106587536 | coding | upstream | 169087 | 73793635 ~ 73891981 (+) |
| rras2 | rras2 | coding | upstream | 271622 | 73744899 ~ 73789243 (+) |
| copb1 | copb | coding | upstream | 319248 | 73733797 ~ 73741617 (+) |
| LOC110526547 | LOC106587501 | coding | upstream | 329025 | 73726127 ~ 73731840 (+) |
| LOC110526546 | LOC106587531 | coding | upstream | 425917 | 73616828 ~ 73634948 (+) |
| LOC118965098 | NA | coding | downstream | 247918 | 74309040 ~ 74309094 (+) |
| LOC118965099 | NA | coding | downstream | 250219 | 74311341 ~ 74311395 (+) |
| LOC118965100 | NA | coding | downstream | 252514 | 74313636 ~ 74313690 (+) |
| LOC118965101 | NA | coding | downstream | 254779 | 74315901 ~ 74315955 (+) |
| LOC118965102 | NA | coding | downstream | 257079 | 74318201 ~ 74318255 (+) |
| G544407 | NA | non-coding | upstream | 25131 | 74035480 ~ 74035734 (+) |
| G544292 | NA | non-coding | upstream | 124926 | 73935727 ~ 73935939 (+) |
| G543997 | NA | non-coding | upstream | 289368 | 73771170 ~ 73771497 (+) |
| G543978 | NA | non-coding | upstream | 335189 | 73725207 ~ 73725676 (+) |
| G544424 | NA | non-coding | downstream | 1571 | 74062693 ~ 74063015 (+) |
| G544427 | NA | non-coding | downstream | 10539 | 74071661 ~ 74071882 (+) |
| G544490 | NA | non-coding | downstream | 104044 | 74165166 ~ 74166823 (+) |
| G544495 | LOC106587540 | non-coding | downstream | 110553 | 74171675 ~ 74188595 (+) |
| G544493 | NA | non-coding | downstream | 121281 | 74182403 ~ 74182729 (+) |
| LOC100136290 | sox6 | other | upstream | 673178 | 73190979 ~ 73392251 (+) |
| LOC110526543 | LOC106587517 | other | upstream | 915518 | 73037953 ~ 73182742 (+) |
| G542890 | NA | other | upstream | 1294014 | 72765681 ~ 72766851 (+) |
| saa | saa | other | upstream | 1393993 | 72665460 ~ 72666872 (+) |
| G542100 | LOC106587475 | other | upstream | 1908471 | 72151020 ~ 72152394 (+) |
| G544565 | NA | other | downstream | 226656 | 74287778 ~ 74288138 (+) |
| G545485 | NA | other | downstream | 1176678 | 75237800 ~ 75238164 (+) |
| G545601 | NA | other | downstream | 1360739 | 75421861 ~ 75422752 (+) |
| G546464 | LOC106562315 | other | downstream | 1867106 | 75928228 ~ 75970674 (+) |
| LOC110526968 | fto | other | downstream | 2826310 | 76827001 ~ 77038395 (+) |
