Gene
RNA
| Item | Value |
|---|---|
| gene id | G544563 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 74286581 ~ 74286851 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU616610 | True | 271 | lncRNA | 0.38 | 1 | 74286581 | 74286851 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tub | LOC106587536 | coding | upstream | 394803 | 73793635 ~ 73891981 (+) |
| rras2 | rras2 | coding | upstream | 497338 | 73744899 ~ 73789243 (+) |
| copb1 | copb | coding | upstream | 544964 | 73733797 ~ 73741617 (+) |
| LOC110526547 | LOC106587501 | coding | upstream | 554741 | 73726127 ~ 73731840 (+) |
| LOC110526546 | LOC106587531 | coding | upstream | 651633 | 73616828 ~ 73634948 (+) |
| LOC118965098 | NA | coding | downstream | 22189 | 74309040 ~ 74309094 (+) |
| LOC118965099 | NA | coding | downstream | 24490 | 74311341 ~ 74311395 (+) |
| LOC118965100 | NA | coding | downstream | 26785 | 74313636 ~ 74313690 (+) |
| LOC118965101 | NA | coding | downstream | 29050 | 74315901 ~ 74315955 (+) |
| LOC118965102 | NA | coding | downstream | 31350 | 74318201 ~ 74318255 (+) |
| G544560 | NA | non-coding | upstream | 3661 | 74282430 ~ 74282920 (+) |
| G544559 | NA | non-coding | upstream | 4261 | 74281713 ~ 74282320 (+) |
| G544554 | NA | non-coding | upstream | 14371 | 74271810 ~ 74272210 (+) |
| G544519 | NA | non-coding | upstream | 40833 | 74245023 ~ 74245748 (+) |
| G544492 | LOC106587540 | non-coding | upstream | 80710 | 74204635 ~ 74205871 (+) |
| G544564 | NA | non-coding | downstream | 476 | 74287327 ~ 74287667 (+) |
| G544567 | LOC106587543 | non-coding | downstream | 4127 | 74290978 ~ 74291200 (+) |
| G544568 | NA | non-coding | downstream | 4535 | 74291386 ~ 74291658 (+) |
| G544569 | NA | non-coding | downstream | 6096 | 74292947 ~ 74293257 (+) |
| G544571 | NA | non-coding | downstream | 8507 | 74295358 ~ 74295852 (+) |
| LOC100136290 | sox6 | other | upstream | 898894 | 73190979 ~ 73392251 (+) |
| LOC110526543 | LOC106587517 | other | upstream | 1141234 | 73037953 ~ 73182742 (+) |
| G542890 | NA | other | upstream | 1519730 | 72765681 ~ 72766851 (+) |
| saa | saa | other | upstream | 1619709 | 72665460 ~ 72666872 (+) |
| G542100 | LOC106587475 | other | upstream | 2134187 | 72151020 ~ 72152394 (+) |
| G544565 | NA | other | downstream | 927 | 74287778 ~ 74288138 (+) |
| G545485 | NA | other | downstream | 950949 | 75237800 ~ 75238164 (+) |
| G545601 | NA | other | downstream | 1135010 | 75421861 ~ 75422752 (+) |
| G546464 | LOC106562315 | other | downstream | 1641377 | 75928228 ~ 75970674 (+) |
| LOC110526968 | fto | other | downstream | 2600581 | 76827001 ~ 77038395 (+) |
