Gene
RNA
| Item | Value |
|---|---|
| gene id | G544758 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 74469982 ~ 74470458 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU616842 | True | 477 | lncRNA | 0.51 | 1 | 74469982 | 74470458 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526569 | LOC106562354 | coding | upstream | 6168 | 74443137 ~ 74463814 (+) |
| LOC110526568 | LOC106587550 | coding | upstream | 39305 | 74395368 ~ 74430677 (+) |
| LOC110526567 | wee1 | coding | upstream | 74945 | 74389782 ~ 74395037 (+) |
| LOC110526565 | LOC106562357 | coding | upstream | 91953 | 74363115 ~ 74378029 (+) |
| LOC118965110 | NA | coding | upstream | 109303 | 74360536 ~ 74360679 (+) |
| LOC110526570 | cyp1a3 | coding | downstream | 34586 | 74505044 ~ 74509032 (+) |
| LOC110526571 | LOC106562351 | coding | downstream | 38989 | 74509447 ~ 74536436 (+) |
| LOC110526572 | LOC106562350 | coding | downstream | 66487 | 74536945 ~ 74580991 (+) |
| LOC110515568 | LOC106587555 | coding | downstream | 131056 | 74601514 ~ 74607809 (+) |
| LOC110526573 | LOC106594537 | coding | downstream | 138933 | 74609391 ~ 74612035 (+) |
| G544757 | NA | non-coding | upstream | 1174 | 74468264 ~ 74468808 (+) |
| G544756 | LOC105416325 | non-coding | upstream | 2010 | 74467627 ~ 74467972 (+) |
| G544754 | NA | non-coding | upstream | 3957 | 74465824 ~ 74466025 (+) |
| G544591 | NA | non-coding | upstream | 136050 | 74333602 ~ 74333932 (+) |
| G544586 | NA | non-coding | upstream | 144738 | 74324910 ~ 74325244 (+) |
| G544761 | NA | non-coding | downstream | 9700 | 74480158 ~ 74480412 (+) |
| G544766 | NA | non-coding | downstream | 21820 | 74492278 ~ 74492583 (+) |
| G544739 | NA | non-coding | downstream | 25632 | 74496090 ~ 74499096 (+) |
| G544817 | NA | non-coding | downstream | 124336 | 74594794 ~ 74595064 (+) |
| G544828 | NA | non-coding | downstream | 141633 | 74612091 ~ 74612578 (+) |
| G544565 | NA | other | upstream | 181844 | 74287778 ~ 74288138 (+) |
| LOC100136290 | sox6 | other | upstream | 1082295 | 73190979 ~ 73392251 (+) |
| LOC110526543 | LOC106587517 | other | upstream | 1324635 | 73037953 ~ 73182742 (+) |
| G542890 | NA | other | upstream | 1703131 | 72765681 ~ 72766851 (+) |
| saa | saa | other | upstream | 1803110 | 72665460 ~ 72666872 (+) |
| G545485 | NA | other | downstream | 767342 | 75237800 ~ 75238164 (+) |
| G545601 | NA | other | downstream | 951403 | 75421861 ~ 75422752 (+) |
| G546464 | LOC106562315 | other | downstream | 1457770 | 75928228 ~ 75970674 (+) |
| LOC110526968 | fto | other | downstream | 2416974 | 76827001 ~ 77038395 (+) |
| G547884 | NA | other | downstream | 2807534 | 77277992 ~ 77279354 (+) |
