Gene
RNA
| Item | Value |
|---|---|
| gene id | G544828 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 74612091 ~ 74612578 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU616923 | True | 488 | lncRNA | 0.30 | 1 | 74612091 | 74612578 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526573 | LOC106594537 | coding | upstream | 56 | 74609391 ~ 74612035 (+) |
| LOC110515568 | LOC106587555 | coding | upstream | 4282 | 74601514 ~ 74607809 (+) |
| LOC110526572 | LOC106562350 | coding | upstream | 31100 | 74536945 ~ 74580991 (+) |
| LOC110526571 | LOC106562351 | coding | upstream | 75655 | 74509447 ~ 74536436 (+) |
| LOC110526570 | cyp1a3 | coding | upstream | 103059 | 74505044 ~ 74509032 (+) |
| LOC110526575 | LOC106587557 | coding | downstream | 18441 | 74631019 ~ 74656748 (+) |
| LOC110526576 | tm2d3 | coding | downstream | 44310 | 74656888 ~ 74663789 (+) |
| LOC110526577 | LOC106587561 | coding | downstream | 59606 | 74672184 ~ 74732529 (+) |
| LOC110526579 | LOC106562344 | coding | downstream | 164701 | 74777279 ~ 74795369 (+) |
| LOC118965044 | LOC106609580 | coding | downstream | 290362 | 74902940 ~ 74903683 (+) |
| G544817 | NA | non-coding | upstream | 17027 | 74594794 ~ 74595064 (+) |
| G544739 | NA | non-coding | upstream | 112995 | 74496090 ~ 74499096 (+) |
| G544766 | NA | non-coding | upstream | 119508 | 74492278 ~ 74492583 (+) |
| G544761 | NA | non-coding | upstream | 131679 | 74480158 ~ 74480412 (+) |
| G544758 | NA | non-coding | upstream | 141633 | 74469982 ~ 74470458 (+) |
| G544829 | NA | non-coding | downstream | 1956 | 74614534 ~ 74614920 (+) |
| G544830 | NA | non-coding | downstream | 2553 | 74615131 ~ 74615703 (+) |
| G544831 | NA | non-coding | downstream | 3244 | 74615822 ~ 74616032 (+) |
| G544832 | NA | non-coding | downstream | 3483 | 74616061 ~ 74616267 (+) |
| G544805 | NA | non-coding | downstream | 3899 | 74616477 ~ 74639188 (+) |
| G544565 | NA | other | upstream | 323953 | 74287778 ~ 74288138 (+) |
| LOC100136290 | sox6 | other | upstream | 1224404 | 73190979 ~ 73392251 (+) |
| LOC110526543 | LOC106587517 | other | upstream | 1466744 | 73037953 ~ 73182742 (+) |
| G542890 | NA | other | upstream | 1845240 | 72765681 ~ 72766851 (+) |
| saa | saa | other | upstream | 1945219 | 72665460 ~ 72666872 (+) |
| G545485 | NA | other | downstream | 625222 | 75237800 ~ 75238164 (+) |
| G545601 | NA | other | downstream | 809283 | 75421861 ~ 75422752 (+) |
| G546464 | LOC106562315 | other | downstream | 1315650 | 75928228 ~ 75970674 (+) |
| LOC110526968 | fto | other | downstream | 2274854 | 76827001 ~ 77038395 (+) |
| G547884 | NA | other | downstream | 2665414 | 77277992 ~ 77279354 (+) |
