G544831


Basic Information

Item Value
gene id G544831
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 74615822 ~ 74616032 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU616927
cccgattgctcagtttgtccgggcagccagctctaggaagagtcttggtggttccaaacttcttccatttaagaatgatggaggccactgtgttcttggggaccttcaatgctgcagatttgttttggtacccttccccagatctgtgcctcgacacaaacttgtcttggagctctatggaattccttcgacctcatgccttggtttttgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU616927 True 211 lncRNA 0.49 1 74615822 74616032

Neighbor

gene id symbol gene type direction distance location
LOC110526573 LOC106594537 coding upstream 3787 74609391 ~ 74612035 (+)
LOC110515568 LOC106587555 coding upstream 8013 74601514 ~ 74607809 (+)
LOC110526572 LOC106562350 coding upstream 34831 74536945 ~ 74580991 (+)
LOC110526571 LOC106562351 coding upstream 79386 74509447 ~ 74536436 (+)
LOC110526570 cyp1a3 coding upstream 106790 74505044 ~ 74509032 (+)
LOC110526575 LOC106587557 coding downstream 14987 74631019 ~ 74656748 (+)
LOC110526576 tm2d3 coding downstream 40856 74656888 ~ 74663789 (+)
LOC110526577 LOC106587561 coding downstream 56152 74672184 ~ 74732529 (+)
LOC110526579 LOC106562344 coding downstream 161247 74777279 ~ 74795369 (+)
LOC118965044 LOC106609580 coding downstream 286908 74902940 ~ 74903683 (+)
G544830 NA non-coding upstream 119 74615131 ~ 74615703 (+)
G544829 NA non-coding upstream 902 74614534 ~ 74614920 (+)
G544828 NA non-coding upstream 3244 74612091 ~ 74612578 (+)
G544817 NA non-coding upstream 20758 74594794 ~ 74595064 (+)
G544739 NA non-coding upstream 116726 74496090 ~ 74499096 (+)
G544832 NA non-coding downstream 29 74616061 ~ 74616267 (+)
G544805 NA non-coding downstream 445 74616477 ~ 74639188 (+)
G544865 NA non-coding downstream 88225 74704257 ~ 74724211 (+)
G545117 NA non-coding downstream 122033 74738065 ~ 74738310 (+)
G544565 NA other upstream 327684 74287778 ~ 74288138 (+)
LOC100136290 sox6 other upstream 1228135 73190979 ~ 73392251 (+)
LOC110526543 LOC106587517 other upstream 1470475 73037953 ~ 73182742 (+)
G542890 NA other upstream 1848971 72765681 ~ 72766851 (+)
saa saa other upstream 1948950 72665460 ~ 72666872 (+)
G545485 NA other downstream 621768 75237800 ~ 75238164 (+)
G545601 NA other downstream 805829 75421861 ~ 75422752 (+)
G546464 LOC106562315 other downstream 1312196 75928228 ~ 75970674 (+)
LOC110526968 fto other downstream 2271400 76827001 ~ 77038395 (+)
G547884 NA other downstream 2661960 77277992 ~ 77279354 (+)

Expression


Co-expression Network