G545117


Basic Information

Item Value
gene id G545117
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 74738065 ~ 74738310 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU617261
ttttttttaaatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagacataaaattgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttaaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU617261 True 246 lncRNA 0.33 1 74738065 74738310

Neighbor

gene id symbol gene type direction distance location
LOC110526577 LOC106587561 coding upstream 5536 74672184 ~ 74732529 (+)
LOC110526576 tm2d3 coding upstream 74276 74656888 ~ 74663789 (+)
LOC110526575 LOC106587557 coding upstream 81317 74631019 ~ 74656748 (+)
LOC110526573 LOC106594537 coding upstream 126030 74609391 ~ 74612035 (+)
LOC110515568 LOC106587555 coding upstream 130256 74601514 ~ 74607809 (+)
LOC110526579 LOC106562344 coding downstream 38969 74777279 ~ 74795369 (+)
LOC118965044 LOC106609580 coding downstream 164630 74902940 ~ 74903683 (+)
LOC110526582 LOC106562373 coding downstream 184086 74922396 ~ 75155528 (+)
LOC110526583 LOC106562374 coding downstream 430258 75168568 ~ 75194690 (+)
LOC110526584 LOC106587566 coding downstream 578195 75316505 ~ 75324636 (+)
G544865 NA non-coding upstream 13854 74704257 ~ 74724211 (+)
G544805 NA non-coding upstream 98877 74616477 ~ 74639188 (+)
G544832 NA non-coding upstream 121798 74616061 ~ 74616267 (+)
G544831 NA non-coding upstream 122033 74615822 ~ 74616032 (+)
G545363 NA non-coding downstream 254302 74992612 ~ 74993103 (+)
G545457 NA non-coding downstream 451409 75189719 ~ 75190182 (+)
G545460 NA non-coding downstream 459996 75198306 ~ 75198529 (+)
G545462 NA non-coding downstream 461401 75199711 ~ 75204903 (+)
G545464 NA non-coding downstream 467973 75206283 ~ 75206642 (+)
G544565 NA other upstream 449927 74287778 ~ 74288138 (+)
LOC100136290 sox6 other upstream 1350378 73190979 ~ 73392251 (+)
LOC110526543 LOC106587517 other upstream 1592718 73037953 ~ 73182742 (+)
G542890 NA other upstream 1971214 72765681 ~ 72766851 (+)
saa saa other upstream 2071193 72665460 ~ 72666872 (+)
G545485 NA other downstream 499490 75237800 ~ 75238164 (+)
G545601 NA other downstream 683551 75421861 ~ 75422752 (+)
G546464 LOC106562315 other downstream 1189918 75928228 ~ 75970674 (+)
LOC110526968 fto other downstream 2149122 76827001 ~ 77038395 (+)
G547884 NA other downstream 2539682 77277992 ~ 77279354 (+)

Expression


Co-expression Network