G545460


Basic Information

Item Value
gene id G545460
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 75198306 ~ 75198529 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU617632
ACAAACACCAGAATCTGCTCCCAAATCCCTGCATCTGGACAACAAACACCAGAATCTGCTCCCAAATCCCTGCAACTGGACAACAAACACCAGAATCTGCTCCCAAATCCCTGCATCTGGACAACAAACACCAGCATCTGCTCCCAAATCCCTGCATCTGGACAACAAACACCAGAATCTGCTCCCAAATCCCTGCATCTGGACAACAAACACCAGAATCTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU617632 True 224 lncRNA 0.49 1 75198306 75198529

Neighbor

gene id symbol gene type direction distance location
LOC110526583 LOC106562374 coding upstream 3616 75168568 ~ 75194690 (+)
LOC110526582 LOC106562373 coding upstream 42778 74922396 ~ 75155528 (+)
LOC118965044 LOC106609580 coding upstream 294623 74902940 ~ 74903683 (+)
LOC110526579 LOC106562344 coding upstream 402937 74777279 ~ 74795369 (+)
LOC110526577 LOC106587561 coding upstream 465777 74672184 ~ 74732529 (+)
LOC110526584 LOC106587566 coding downstream 117976 75316505 ~ 75324636 (+)
LOC110526588 LOC106562377 coding downstream 195268 75393797 ~ 75408675 (+)
LOC110526592 LOC106587573 coding downstream 256458 75454987 ~ 75456513 (+)
LOC110526593 cnep1r1 coding downstream 258073 75456602 ~ 75459378 (+)
heatr3 LOC106587571 coding downstream 261130 75459659 ~ 75468641 (+)
G545457 NA non-coding upstream 8124 75189719 ~ 75190182 (+)
G545363 NA non-coding upstream 205203 74992612 ~ 74993103 (+)
G545117 NA non-coding upstream 459996 74738065 ~ 74738310 (+)
G544865 NA non-coding upstream 474095 74704257 ~ 74724211 (+)
G545462 NA non-coding downstream 1182 75199711 ~ 75204903 (+)
G545464 NA non-coding downstream 7754 75206283 ~ 75206642 (+)
G545470 NA non-coding downstream 18809 75217338 ~ 75217617 (+)
G545478 NA non-coding downstream 30159 75228688 ~ 75228927 (+)
G545479 NA non-coding downstream 31537 75230066 ~ 75230364 (+)
G544565 NA other upstream 910168 74287778 ~ 74288138 (+)
LOC100136290 sox6 other upstream 1810619 73190979 ~ 73392251 (+)
LOC110526543 LOC106587517 other upstream 2052959 73037953 ~ 73182742 (+)
G542890 NA other upstream 2431455 72765681 ~ 72766851 (+)
saa saa other upstream 2531434 72665460 ~ 72666872 (+)
G545485 NA other downstream 39271 75237800 ~ 75238164 (+)
G545601 NA other downstream 223332 75421861 ~ 75422752 (+)
G546464 LOC106562315 other downstream 729699 75928228 ~ 75970674 (+)
LOC110526968 fto other downstream 1688903 76827001 ~ 77038395 (+)
G547884 NA other downstream 2079463 77277992 ~ 77279354 (+)

Expression


Co-expression Network