Gene
RNA
| Item | Value |
|---|---|
| gene id | G545478 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 75228688 ~ 75228927 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU617655 | True | 240 | lncRNA | 0.45 | 1 | 75228688 | 75228927 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526583 | LOC106562374 | coding | upstream | 33998 | 75168568 ~ 75194690 (+) |
| LOC110526582 | LOC106562373 | coding | upstream | 73160 | 74922396 ~ 75155528 (+) |
| LOC118965044 | LOC106609580 | coding | upstream | 325005 | 74902940 ~ 74903683 (+) |
| LOC110526579 | LOC106562344 | coding | upstream | 433319 | 74777279 ~ 74795369 (+) |
| LOC110526577 | LOC106587561 | coding | upstream | 496159 | 74672184 ~ 74732529 (+) |
| LOC110526584 | LOC106587566 | coding | downstream | 87578 | 75316505 ~ 75324636 (+) |
| LOC110526588 | LOC106562377 | coding | downstream | 164870 | 75393797 ~ 75408675 (+) |
| LOC110526592 | LOC106587573 | coding | downstream | 226060 | 75454987 ~ 75456513 (+) |
| LOC110526593 | cnep1r1 | coding | downstream | 227675 | 75456602 ~ 75459378 (+) |
| heatr3 | LOC106587571 | coding | downstream | 230732 | 75459659 ~ 75468641 (+) |
| G545470 | NA | non-coding | upstream | 11071 | 75217338 ~ 75217617 (+) |
| G545464 | NA | non-coding | upstream | 22046 | 75206283 ~ 75206642 (+) |
| G545462 | NA | non-coding | upstream | 23785 | 75199711 ~ 75204903 (+) |
| G545460 | NA | non-coding | upstream | 30159 | 75198306 ~ 75198529 (+) |
| G545457 | NA | non-coding | upstream | 38506 | 75189719 ~ 75190182 (+) |
| G545479 | NA | non-coding | downstream | 1139 | 75230066 ~ 75230364 (+) |
| G545481 | NA | non-coding | downstream | 2929 | 75231856 ~ 75232202 (+) |
| G545494 | NA | non-coding | downstream | 16889 | 75245816 ~ 75246243 (+) |
| G545504 | NA | non-coding | downstream | 26447 | 75255374 ~ 75255580 (+) |
| G545506 | NA | non-coding | downstream | 28075 | 75257002 ~ 75257228 (+) |
| G544565 | NA | other | upstream | 940550 | 74287778 ~ 74288138 (+) |
| LOC100136290 | sox6 | other | upstream | 1841001 | 73190979 ~ 73392251 (+) |
| LOC110526543 | LOC106587517 | other | upstream | 2083341 | 73037953 ~ 73182742 (+) |
| G542890 | NA | other | upstream | 2461837 | 72765681 ~ 72766851 (+) |
| saa | saa | other | upstream | 2561816 | 72665460 ~ 72666872 (+) |
| G545485 | NA | other | downstream | 8873 | 75237800 ~ 75238164 (+) |
| G545601 | NA | other | downstream | 192934 | 75421861 ~ 75422752 (+) |
| G546464 | LOC106562315 | other | downstream | 699301 | 75928228 ~ 75970674 (+) |
| LOC110526968 | fto | other | downstream | 1658505 | 76827001 ~ 77038395 (+) |
| G547884 | NA | other | downstream | 2049065 | 77277992 ~ 77279354 (+) |
