G545494


Basic Information

Item Value
gene id G545494
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 75245816 ~ 75246243 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU617674
cgtgctgctgctccagtttcaactgttctgccttattattattcgaccatgctggtcattcatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccaaaagaggactggccatcccacatatgctctctctaattctctctttctttctctctctcggaggacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactgttctgccttattattattcgaccatgctggtcatttatgaacattgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU617674 True 428 lncRNA 0.48 1 75245816 75246243

Neighbor

gene id symbol gene type direction distance location
LOC110526583 LOC106562374 coding upstream 51126 75168568 ~ 75194690 (+)
LOC110526582 LOC106562373 coding upstream 90288 74922396 ~ 75155528 (+)
LOC118965044 LOC106609580 coding upstream 342133 74902940 ~ 74903683 (+)
LOC110526579 LOC106562344 coding upstream 450447 74777279 ~ 74795369 (+)
LOC110526577 LOC106587561 coding upstream 513287 74672184 ~ 74732529 (+)
LOC110526584 LOC106587566 coding downstream 70262 75316505 ~ 75324636 (+)
LOC110526588 LOC106562377 coding downstream 147554 75393797 ~ 75408675 (+)
LOC110526592 LOC106587573 coding downstream 208744 75454987 ~ 75456513 (+)
LOC110526593 cnep1r1 coding downstream 210359 75456602 ~ 75459378 (+)
heatr3 LOC106587571 coding downstream 213416 75459659 ~ 75468641 (+)
G545481 NA non-coding upstream 13614 75231856 ~ 75232202 (+)
G545479 NA non-coding upstream 15452 75230066 ~ 75230364 (+)
G545478 NA non-coding upstream 16889 75228688 ~ 75228927 (+)
G545470 NA non-coding upstream 28199 75217338 ~ 75217617 (+)
G545464 NA non-coding upstream 39174 75206283 ~ 75206642 (+)
G545504 NA non-coding downstream 9131 75255374 ~ 75255580 (+)
G545506 NA non-coding downstream 10759 75257002 ~ 75257228 (+)
G545492 NA non-coding downstream 88767 75335010 ~ 75337018 (+)
G545600 NA non-coding downstream 172806 75419049 ~ 75490051 (+)
G545618 NA non-coding downstream 197447 75443690 ~ 75444352 (+)
G545485 NA other upstream 7652 75237800 ~ 75238164 (+)
G544565 NA other upstream 957678 74287778 ~ 74288138 (+)
LOC100136290 sox6 other upstream 1858129 73190979 ~ 73392251 (+)
LOC110526543 LOC106587517 other upstream 2100469 73037953 ~ 73182742 (+)
G542890 NA other upstream 2478965 72765681 ~ 72766851 (+)
G545601 NA other downstream 175618 75421861 ~ 75422752 (+)
G546464 LOC106562315 other downstream 681985 75928228 ~ 75970674 (+)
LOC110526968 fto other downstream 1641189 76827001 ~ 77038395 (+)
G547884 NA other downstream 2031749 77277992 ~ 77279354 (+)
G548000 NA other downstream 2266366 77512609 ~ 77523423 (+)

Expression


Co-expression Network