Gene
RNA
| Item | Value |
|---|---|
| gene id | G545618 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 75443690 ~ 75444352 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU617812 | True | 616 | lncRNA | 0.33 | 2 | 75443690 | 75444352 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526588 | LOC106562377 | coding | upstream | 35015 | 75393797 ~ 75408675 (+) |
| LOC110526584 | LOC106587566 | coding | upstream | 119054 | 75316505 ~ 75324636 (+) |
| LOC110526583 | LOC106562374 | coding | upstream | 249000 | 75168568 ~ 75194690 (+) |
| LOC110526582 | LOC106562373 | coding | upstream | 288162 | 74922396 ~ 75155528 (+) |
| LOC118965044 | LOC106609580 | coding | upstream | 540007 | 74902940 ~ 74903683 (+) |
| LOC110526592 | LOC106587573 | coding | downstream | 10635 | 75454987 ~ 75456513 (+) |
| LOC110526593 | cnep1r1 | coding | downstream | 12250 | 75456602 ~ 75459378 (+) |
| heatr3 | LOC106587571 | coding | downstream | 15307 | 75459659 ~ 75468641 (+) |
| tent4b | LOC106587575 | coding | downstream | 29691 | 75474043 ~ 75498286 (+) |
| LOC110526596 | LOC106587576 | coding | downstream | 54344 | 75498696 ~ 75572903 (+) |
| G545492 | NA | non-coding | upstream | 106672 | 75335010 ~ 75337018 (+) |
| G545506 | NA | non-coding | upstream | 186462 | 75257002 ~ 75257228 (+) |
| G545504 | NA | non-coding | upstream | 188110 | 75255374 ~ 75255580 (+) |
| G545494 | NA | non-coding | upstream | 197447 | 75245816 ~ 75246243 (+) |
| G545481 | NA | non-coding | upstream | 211488 | 75231856 ~ 75232202 (+) |
| G545684 | NA | non-coding | downstream | 152813 | 75597165 ~ 75597427 (+) |
| G545725 | NA | non-coding | downstream | 213943 | 75658295 ~ 75658516 (+) |
| G545742 | NA | non-coding | downstream | 242395 | 75686747 ~ 75689195 (+) |
| G545716 | NA | non-coding | downstream | 259138 | 75703490 ~ 75728642 (+) |
| G545601 | NA | other | upstream | 20938 | 75421861 ~ 75422752 (+) |
| G545485 | NA | other | upstream | 205526 | 75237800 ~ 75238164 (+) |
| G544565 | NA | other | upstream | 1155552 | 74287778 ~ 74288138 (+) |
| LOC100136290 | sox6 | other | upstream | 2056003 | 73190979 ~ 73392251 (+) |
| LOC110526543 | LOC106587517 | other | upstream | 2298343 | 73037953 ~ 73182742 (+) |
| G546464 | LOC106562315 | other | downstream | 483876 | 75928228 ~ 75970674 (+) |
| LOC110526968 | fto | other | downstream | 1443080 | 76827001 ~ 77038395 (+) |
| G547884 | NA | other | downstream | 1833640 | 77277992 ~ 77279354 (+) |
| G548000 | NA | other | downstream | 2068257 | 77512609 ~ 77523423 (+) |
| LOC110526614 | mmp2 | other | downstream | 2370023 | 77814375 ~ 77847797 (+) |
