Gene
RNA
| Item | Value |
|---|---|
| gene id | G545742 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 75686747 ~ 75689195 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU617944 | True | 298 | lncRNA | 0.55 | 2 | 75686747 | 75689195 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526596 | LOC106587576 | coding | upstream | 113844 | 75498696 ~ 75572903 (+) |
| tent4b | LOC106587575 | coding | upstream | 190529 | 75474043 ~ 75498286 (+) |
| heatr3 | LOC106587571 | coding | upstream | 218106 | 75459659 ~ 75468641 (+) |
| LOC110526593 | cnep1r1 | coding | upstream | 227369 | 75456602 ~ 75459378 (+) |
| LOC110526592 | LOC106587573 | coding | upstream | 230234 | 75454987 ~ 75456513 (+) |
| nod2 | nod2 | coding | downstream | 63742 | 75752937 ~ 75765291 (+) |
| cylda | LOC100380700 | coding | downstream | 90221 | 75779416 ~ 75815231 (+) |
| LOC118964933 | chd9 | coding | downstream | 915495 | 76604690 ~ 76620121 (+) |
| LOC110526968 | fto | coding | downstream | 1137806 | 76827001 ~ 77038395 (+) |
| irx5a | irx5 | coding | downstream | 1806558 | 77495753 ~ 77499433 (+) |
| G545725 | NA | non-coding | upstream | 28231 | 75658295 ~ 75658516 (+) |
| G545684 | NA | non-coding | upstream | 89320 | 75597165 ~ 75597427 (+) |
| G545600 | NA | non-coding | upstream | 196696 | 75419049 ~ 75490051 (+) |
| G545618 | NA | non-coding | upstream | 242395 | 75443690 ~ 75444352 (+) |
| G545716 | NA | non-coding | downstream | 14295 | 75703490 ~ 75728642 (+) |
| G545757 | NA | non-coding | downstream | 44451 | 75733646 ~ 75734326 (+) |
| G545769 | NA | non-coding | downstream | 81410 | 75770605 ~ 75770861 (+) |
| G545772 | NA | non-coding | downstream | 84439 | 75773634 ~ 75773869 (+) |
| G545774 | NA | non-coding | downstream | 89606 | 75778801 ~ 75779033 (+) |
| G545601 | NA | other | upstream | 263995 | 75421861 ~ 75422752 (+) |
| G545485 | NA | other | upstream | 448583 | 75237800 ~ 75238164 (+) |
| G544565 | NA | other | upstream | 1398609 | 74287778 ~ 74288138 (+) |
| LOC100136290 | sox6 | other | upstream | 2299060 | 73190979 ~ 73392251 (+) |
| LOC110526543 | LOC106587517 | other | upstream | 2541400 | 73037953 ~ 73182742 (+) |
| G546464 | LOC106562315 | other | downstream | 239033 | 75928228 ~ 75970674 (+) |
| G547884 | NA | other | downstream | 1588797 | 77277992 ~ 77279354 (+) |
| G548000 | NA | other | downstream | 1823414 | 77512609 ~ 77523423 (+) |
| LOC110526614 | mmp2 | other | downstream | 2125180 | 77814375 ~ 77847797 (+) |
