Gene
RNA
| Item | Value |
|---|---|
| gene id | G545769 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 75770605 ~ 75770861 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU617972 | True | 257 | lncRNA | 0.33 | 1 | 75770605 | 75770861 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nod2 | nod2 | coding | upstream | 5314 | 75752937 ~ 75765291 (+) |
| LOC110526967 | LOC106587577 | coding | upstream | 68003 | 75664369 ~ 75702602 (+) |
| LOC110526596 | LOC106587576 | coding | upstream | 197702 | 75498696 ~ 75572903 (+) |
| tent4b | LOC106587575 | coding | upstream | 274387 | 75474043 ~ 75498286 (+) |
| heatr3 | LOC106587571 | coding | upstream | 301964 | 75459659 ~ 75468641 (+) |
| cylda | LOC100380700 | coding | downstream | 8555 | 75779416 ~ 75815231 (+) |
| LOC118964933 | chd9 | coding | downstream | 833829 | 76604690 ~ 76620121 (+) |
| LOC110526968 | fto | coding | downstream | 1056140 | 76827001 ~ 77038395 (+) |
| irx5a | irx5 | coding | downstream | 1724892 | 77495753 ~ 77499433 (+) |
| LOC110526613 | LOC106587615 | coding | downstream | 1952964 | 77723825 ~ 77730489 (+) |
| G545757 | NA | non-coding | upstream | 36279 | 75733646 ~ 75734326 (+) |
| G545716 | NA | non-coding | upstream | 41963 | 75703490 ~ 75728642 (+) |
| G545742 | NA | non-coding | upstream | 81410 | 75686747 ~ 75689195 (+) |
| G545725 | NA | non-coding | upstream | 112089 | 75658295 ~ 75658516 (+) |
| G545684 | NA | non-coding | upstream | 173178 | 75597165 ~ 75597427 (+) |
| G545772 | NA | non-coding | downstream | 2773 | 75773634 ~ 75773869 (+) |
| G545774 | NA | non-coding | downstream | 7940 | 75778801 ~ 75779033 (+) |
| G545790 | NA | non-coding | downstream | 49326 | 75820187 ~ 75820522 (+) |
| G546373 | NA | non-coding | downstream | 82776 | 75853637 ~ 75860809 (+) |
| G546404 | NA | non-coding | downstream | 107366 | 75878227 ~ 75878737 (+) |
| G545601 | NA | other | upstream | 347853 | 75421861 ~ 75422752 (+) |
| G545485 | NA | other | upstream | 532441 | 75237800 ~ 75238164 (+) |
| G544565 | NA | other | upstream | 1482467 | 74287778 ~ 74288138 (+) |
| LOC100136290 | sox6 | other | upstream | 2382918 | 73190979 ~ 73392251 (+) |
| LOC110526543 | LOC106587517 | other | upstream | 2625258 | 73037953 ~ 73182742 (+) |
| G546464 | LOC106562315 | other | downstream | 157367 | 75928228 ~ 75970674 (+) |
| G547884 | NA | other | downstream | 1507131 | 77277992 ~ 77279354 (+) |
| G548000 | NA | other | downstream | 1741748 | 77512609 ~ 77523423 (+) |
| LOC110526614 | mmp2 | other | downstream | 2043514 | 77814375 ~ 77847797 (+) |
