G545774


Basic Information

Item Value
gene id G545774
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 75778801 ~ 75779033 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU617977
tttgtaagctgttagtgtcttaaagaccgttccacaggtgcatgttcattaattatttatggttcattgaacaaacatgggaaacagtgtttaaaccctttacaatgacgatctgtgaagttatttggatttttacgaattatctttgaaagacagggtcctgaaaaagggacgtttctttttttgctgagtatatGTTACTTTTTCCTTGACTGGAATATTGCATATAGATC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU617977 True 233 lncRNA 0.34 1 75778801 75779033

Neighbor

gene id symbol gene type direction distance location
nod2 nod2 coding upstream 13510 75752937 ~ 75765291 (+)
LOC110526967 LOC106587577 coding upstream 76199 75664369 ~ 75702602 (+)
LOC110526596 LOC106587576 coding upstream 205898 75498696 ~ 75572903 (+)
tent4b LOC106587575 coding upstream 282583 75474043 ~ 75498286 (+)
heatr3 LOC106587571 coding upstream 310160 75459659 ~ 75468641 (+)
cylda LOC100380700 coding downstream 383 75779416 ~ 75815231 (+)
LOC118964933 chd9 coding downstream 825657 76604690 ~ 76620121 (+)
LOC110526968 fto coding downstream 1047968 76827001 ~ 77038395 (+)
irx5a irx5 coding downstream 1716720 77495753 ~ 77499433 (+)
LOC110526613 LOC106587615 coding downstream 1944792 77723825 ~ 77730489 (+)
G545772 NA non-coding upstream 4932 75773634 ~ 75773869 (+)
G545769 NA non-coding upstream 7940 75770605 ~ 75770861 (+)
G545757 NA non-coding upstream 44475 75733646 ~ 75734326 (+)
G545716 NA non-coding upstream 50159 75703490 ~ 75728642 (+)
G545742 NA non-coding upstream 89606 75686747 ~ 75689195 (+)
G545790 NA non-coding downstream 41154 75820187 ~ 75820522 (+)
G546373 NA non-coding downstream 74604 75853637 ~ 75860809 (+)
G546404 NA non-coding downstream 99194 75878227 ~ 75878737 (+)
G546440 NA non-coding downstream 122485 75901518 ~ 75901753 (+)
G546444 NA non-coding downstream 127520 75906553 ~ 75909615 (+)
G545601 NA other upstream 356049 75421861 ~ 75422752 (+)
G545485 NA other upstream 540637 75237800 ~ 75238164 (+)
G544565 NA other upstream 1490663 74287778 ~ 74288138 (+)
LOC100136290 sox6 other upstream 2391114 73190979 ~ 73392251 (+)
LOC110526543 LOC106587517 other upstream 2633454 73037953 ~ 73182742 (+)
G546464 LOC106562315 other downstream 149195 75928228 ~ 75970674 (+)
G547884 NA other downstream 1498959 77277992 ~ 77279354 (+)
G548000 NA other downstream 1733576 77512609 ~ 77523423 (+)
LOC110526614 mmp2 other downstream 2035342 77814375 ~ 77847797 (+)

Expression


Co-expression Network