Gene
RNA
| Item | Value |
|---|---|
| gene id | G546461 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 75923907 ~ 75924173 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU618725 | True | 267 | lncRNA | 0.54 | 1 | 75923907 | 75924173 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cylda | LOC100380700 | coding | upstream | 108676 | 75779416 ~ 75815231 (+) |
| nod2 | nod2 | coding | upstream | 158616 | 75752937 ~ 75765291 (+) |
| LOC110526967 | LOC106587577 | coding | upstream | 221305 | 75664369 ~ 75702602 (+) |
| LOC110526596 | LOC106587576 | coding | upstream | 351004 | 75498696 ~ 75572903 (+) |
| tent4b | LOC106587575 | coding | upstream | 427689 | 75474043 ~ 75498286 (+) |
| LOC118964933 | chd9 | coding | downstream | 680517 | 76604690 ~ 76620121 (+) |
| LOC110526968 | fto | coding | downstream | 902828 | 76827001 ~ 77038395 (+) |
| irx5a | irx5 | coding | downstream | 1571580 | 77495753 ~ 77499433 (+) |
| LOC110526613 | LOC106587615 | coding | downstream | 1799652 | 77723825 ~ 77730489 (+) |
| LOC110526614 | mmp2 | coding | downstream | 1890207 | 77814375 ~ 77847797 (+) |
| G546446 | NA | non-coding | upstream | 12058 | 75911540 ~ 75911849 (+) |
| G546444 | NA | non-coding | upstream | 14292 | 75906553 ~ 75909615 (+) |
| G546440 | NA | non-coding | upstream | 22154 | 75901518 ~ 75901753 (+) |
| G546404 | NA | non-coding | upstream | 45170 | 75878227 ~ 75878737 (+) |
| G546373 | NA | non-coding | upstream | 63098 | 75853637 ~ 75860809 (+) |
| G546472 | NA | non-coding | downstream | 20361 | 75944534 ~ 75959568 (+) |
| G546475 | NA | non-coding | downstream | 40705 | 75964878 ~ 75967129 (+) |
| G546486 | NA | non-coding | downstream | 71237 | 75995410 ~ 75995643 (+) |
| G546488 | NA | non-coding | downstream | 77819 | 76001992 ~ 76008034 (+) |
| G546570 | NA | non-coding | downstream | 141732 | 76065905 ~ 76066122 (+) |
| G545601 | NA | other | upstream | 501155 | 75421861 ~ 75422752 (+) |
| G545485 | NA | other | upstream | 685743 | 75237800 ~ 75238164 (+) |
| G544565 | NA | other | upstream | 1635769 | 74287778 ~ 74288138 (+) |
| LOC100136290 | sox6 | other | upstream | 2536220 | 73190979 ~ 73392251 (+) |
| LOC110526543 | LOC106587517 | other | upstream | 2778560 | 73037953 ~ 73182742 (+) |
| G546464 | LOC106562315 | other | downstream | 4055 | 75928228 ~ 75970674 (+) |
| G547884 | NA | other | downstream | 1353819 | 77277992 ~ 77279354 (+) |
| G548000 | NA | other | downstream | 1588436 | 77512609 ~ 77523423 (+) |
