Gene
RNA
| Item | Value |
|---|---|
| gene id | G546539 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 76028675 ~ 76028913 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106531661, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU618812 | True | 239 | lncRNA | 0.48 | 1 | 76028675 | 76028913 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sall1a | LOC106587587 | coding | downstream | 44987 | 75969021 ~ 75983688 (-) |
| LOC110526598 | m4a4a | coding | downstream | 284162 | 75741757 ~ 75744513 (-) |
| LOC118936660 | NA | coding | downstream | 288461 | 75733636 ~ 75740214 (-) |
| LOC110526597 | brd7 | coding | downstream | 444626 | 75573111 ~ 75584049 (-) |
| LOC110526589 | LOC106562336 | coding | downstream | 574689 | 75449759 ~ 75453986 (-) |
| LOC110526602 | tox3 | coding | upstream | 286058 | 76314971 ~ 76379993 (-) |
| LOC110526603 | NA | coding | upstream | 539973 | 76568886 ~ 76570715 (-) |
| LOC110526606 | LOC106587590 | coding | upstream | 542452 | 76571365 ~ 76586989 (-) |
| chd9 | chd9 | coding | upstream | 562810 | 76591723 ~ 76723031 (-) |
| aktip | LOC106587594 | coding | upstream | 695513 | 76724426 ~ 76732941 (-) |
| G546538 | NA | non-coding | downstream | 904 | 76027536 ~ 76027771 (-) |
| G546445 | NA | non-coding | downstream | 118499 | 75907157 ~ 75910176 (-) |
| G546436 | NA | non-coding | downstream | 129456 | 75898958 ~ 75899219 (-) |
| G546379 | NA | non-coding | downstream | 183822 | 75836254 ~ 75844853 (-) |
| G546342 | NA | non-coding | downstream | 206334 | 75822048 ~ 75822341 (-) |
| G546601 | NA | non-coding | upstream | 66305 | 76095218 ~ 76097766 (-) |
| G546609 | NA | non-coding | upstream | 81331 | 76110244 ~ 76110455 (-) |
| G546610 | NA | non-coding | upstream | 82489 | 76111402 ~ 76111613 (-) |
| G546627 | NA | non-coding | upstream | 99511 | 76128424 ~ 76128659 (-) |
| G546654 | NA | non-coding | upstream | 108053 | 76136966 ~ 76137169 (-) |
| G546283 | NA | other | downstream | 300201 | 75703438 ~ 75728474 (-) |
| LOC110526965 | LOC106587563 | other | downstream | 1229192 | 74798044 ~ 74837516 (-) |
| LOC110526574 | LOC106587558 | other | downstream | 1400432 | 74616464 ~ 74630725 (-) |
| G544923 | NA | other | downstream | 1595383 | 74413305 ~ 74433292 (-) |
| G544882 | LOC106562356 | other | downstream | 1668253 | 74359261 ~ 74360422 (-) |
| G547165 | NA | other | upstream | 497908 | 76526821 ~ 76527268 (-) |
| G547378 | LOC106587591 | other | upstream | 643415 | 76672328 ~ 76672839 (-) |
| G547381 | NA | other | upstream | 650566 | 76679479 ~ 76681822 (-) |
| G547663 | NA | other | upstream | 893041 | 76921954 ~ 76928469 (-) |
| G548203 | NA | other | upstream | 1365086 | 77393999 ~ 77396655 (-) |
