Gene
RNA
| Item | Value |
|---|---|
| gene id | G546582 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 76074798 ~ 76075231 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU618855 | True | 434 | lncRNA | 0.53 | 1 | 76074798 | 76075231 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cylda | LOC100380700 | coding | upstream | 259567 | 75779416 ~ 75815231 (+) |
| nod2 | nod2 | coding | upstream | 309507 | 75752937 ~ 75765291 (+) |
| LOC110526967 | LOC106587577 | coding | upstream | 372196 | 75664369 ~ 75702602 (+) |
| LOC110526596 | LOC106587576 | coding | upstream | 501895 | 75498696 ~ 75572903 (+) |
| tent4b | LOC106587575 | coding | upstream | 578580 | 75474043 ~ 75498286 (+) |
| LOC118964933 | chd9 | coding | downstream | 529459 | 76604690 ~ 76620121 (+) |
| LOC110526968 | fto | coding | downstream | 751770 | 76827001 ~ 77038395 (+) |
| irx5a | irx5 | coding | downstream | 1420522 | 77495753 ~ 77499433 (+) |
| LOC110526613 | LOC106587615 | coding | downstream | 1648594 | 77723825 ~ 77730489 (+) |
| LOC110526614 | mmp2 | coding | downstream | 1739149 | 77814375 ~ 77847797 (+) |
| G546570 | NA | non-coding | upstream | 8676 | 76065905 ~ 76066122 (+) |
| G546488 | NA | non-coding | upstream | 66764 | 76001992 ~ 76008034 (+) |
| G546486 | NA | non-coding | upstream | 79155 | 75995410 ~ 75995643 (+) |
| G546475 | NA | non-coding | upstream | 107669 | 75964878 ~ 75967129 (+) |
| G546472 | NA | non-coding | upstream | 115230 | 75944534 ~ 75959568 (+) |
| G546608 | NA | non-coding | downstream | 34797 | 76110028 ~ 76110239 (+) |
| G546617 | NA | non-coding | downstream | 44208 | 76119439 ~ 76119696 (+) |
| G546618 | NA | non-coding | downstream | 45137 | 76120368 ~ 76120632 (+) |
| G546623 | NA | non-coding | downstream | 48092 | 76123323 ~ 76123641 (+) |
| G546795 | NA | non-coding | downstream | 176244 | 76251475 ~ 76251682 (+) |
| G546464 | LOC106562315 | other | upstream | 104124 | 75928228 ~ 75970674 (+) |
| G545601 | NA | other | upstream | 652046 | 75421861 ~ 75422752 (+) |
| G545485 | NA | other | upstream | 836634 | 75237800 ~ 75238164 (+) |
| G544565 | NA | other | upstream | 1786660 | 74287778 ~ 74288138 (+) |
| LOC100136290 | sox6 | other | upstream | 2687111 | 73190979 ~ 73392251 (+) |
| G547884 | NA | other | downstream | 1202761 | 77277992 ~ 77279354 (+) |
| G548000 | NA | other | downstream | 1437378 | 77512609 ~ 77523423 (+) |
| LOC110526615 | pcat2 | other | downstream | 1786837 | 77848962 ~ 77866316 (+) |
