Gene
RNA
| Item | Value |
|---|---|
| gene id | G546907 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 76389560 ~ 76399024 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU619200 | True | 200 | lncRNA | 0.45 | 2 | 76389560 | 76399024 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cylda | LOC100380700 | coding | upstream | 574329 | 75779416 ~ 75815231 (+) |
| nod2 | nod2 | coding | upstream | 624269 | 75752937 ~ 75765291 (+) |
| LOC110526967 | LOC106587577 | coding | upstream | 686958 | 75664369 ~ 75702602 (+) |
| LOC110526596 | LOC106587576 | coding | upstream | 816657 | 75498696 ~ 75572903 (+) |
| tent4b | LOC106587575 | coding | upstream | 893342 | 75474043 ~ 75498286 (+) |
| LOC118964933 | chd9 | coding | downstream | 205666 | 76604690 ~ 76620121 (+) |
| LOC110526968 | fto | coding | downstream | 427977 | 76827001 ~ 77038395 (+) |
| irx5a | irx5 | coding | downstream | 1096729 | 77495753 ~ 77499433 (+) |
| LOC110526613 | LOC106587615 | coding | downstream | 1324801 | 77723825 ~ 77730489 (+) |
| LOC110526614 | mmp2 | coding | downstream | 1415356 | 77814375 ~ 77847797 (+) |
| G546900 | NA | non-coding | upstream | 15096 | 76374193 ~ 76374464 (+) |
| G546886 | NA | non-coding | upstream | 34908 | 76354429 ~ 76354652 (+) |
| G546809 | NA | non-coding | upstream | 127118 | 76262237 ~ 76262442 (+) |
| G546802 | LOC106613263 | non-coding | upstream | 132520 | 76256795 ~ 76257040 (+) |
| G546795 | NA | non-coding | upstream | 137878 | 76251475 ~ 76251682 (+) |
| G546947 | NA | non-coding | downstream | 31819 | 76430843 ~ 76433281 (+) |
| G547163 | NA | non-coding | downstream | 123758 | 76522782 ~ 76523600 (+) |
| G547229 | NA | non-coding | downstream | 212384 | 76611408 ~ 76612985 (+) |
| G547239 | chd9 | non-coding | downstream | 227174 | 76626198 ~ 76629445 (+) |
| G546464 | LOC106562315 | other | upstream | 418886 | 75928228 ~ 75970674 (+) |
| G545601 | NA | other | upstream | 966808 | 75421861 ~ 75422752 (+) |
| G545485 | NA | other | upstream | 1151396 | 75237800 ~ 75238164 (+) |
| G544565 | NA | other | upstream | 2101422 | 74287778 ~ 74288138 (+) |
| LOC100136290 | sox6 | other | upstream | 3001873 | 73190979 ~ 73392251 (+) |
| G547884 | NA | other | downstream | 878968 | 77277992 ~ 77279354 (+) |
| G548000 | NA | other | downstream | 1113585 | 77512609 ~ 77523423 (+) |
| LOC110526615 | pcat2 | other | downstream | 1463044 | 77848962 ~ 77866316 (+) |
