Gene
RNA
| Item | Value |
|---|---|
| gene id | G546947 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 76430843 ~ 76433281 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU619240 | True | 210 | lncRNA | 0.43 | 2 | 76430843 | 76433281 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cylda | LOC100380700 | coding | upstream | 615612 | 75779416 ~ 75815231 (+) |
| nod2 | nod2 | coding | upstream | 665552 | 75752937 ~ 75765291 (+) |
| LOC110526967 | LOC106587577 | coding | upstream | 728241 | 75664369 ~ 75702602 (+) |
| LOC110526596 | LOC106587576 | coding | upstream | 857940 | 75498696 ~ 75572903 (+) |
| tent4b | LOC106587575 | coding | upstream | 934625 | 75474043 ~ 75498286 (+) |
| LOC118964933 | chd9 | coding | downstream | 171409 | 76604690 ~ 76620121 (+) |
| LOC110526968 | fto | coding | downstream | 393720 | 76827001 ~ 77038395 (+) |
| irx5a | irx5 | coding | downstream | 1062472 | 77495753 ~ 77499433 (+) |
| LOC110526613 | LOC106587615 | coding | downstream | 1290544 | 77723825 ~ 77730489 (+) |
| LOC110526614 | mmp2 | coding | downstream | 1381099 | 77814375 ~ 77847797 (+) |
| G546907 | NA | non-coding | upstream | 31819 | 76389560 ~ 76399024 (+) |
| G546900 | NA | non-coding | upstream | 56379 | 76374193 ~ 76374464 (+) |
| G546886 | NA | non-coding | upstream | 76191 | 76354429 ~ 76354652 (+) |
| G546809 | NA | non-coding | upstream | 168401 | 76262237 ~ 76262442 (+) |
| G546802 | LOC106613263 | non-coding | upstream | 173803 | 76256795 ~ 76257040 (+) |
| G547163 | NA | non-coding | downstream | 89501 | 76522782 ~ 76523600 (+) |
| G547229 | NA | non-coding | downstream | 178127 | 76611408 ~ 76612985 (+) |
| G547239 | chd9 | non-coding | downstream | 192917 | 76626198 ~ 76629445 (+) |
| G547183 | NA | non-coding | downstream | 208150 | 76641431 ~ 76641992 (+) |
| G546464 | LOC106562315 | other | upstream | 460169 | 75928228 ~ 75970674 (+) |
| G545601 | NA | other | upstream | 1008091 | 75421861 ~ 75422752 (+) |
| G545485 | NA | other | upstream | 1192679 | 75237800 ~ 75238164 (+) |
| G544565 | NA | other | upstream | 2142705 | 74287778 ~ 74288138 (+) |
| LOC100136290 | sox6 | other | upstream | 3043156 | 73190979 ~ 73392251 (+) |
| G547884 | NA | other | downstream | 844711 | 77277992 ~ 77279354 (+) |
| G548000 | NA | other | downstream | 1079328 | 77512609 ~ 77523423 (+) |
| LOC110526615 | pcat2 | other | downstream | 1428787 | 77848962 ~ 77866316 (+) |
