G547278


Basic Information

Item Value
gene id G547278
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 76676497 ~ 76677048 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU619590
TGATAATGATATAGCCTTAACATAGGCTTGATAATGGTATAGCCTTGACATAGGCTTGATAATGATATAGTCTTGACATAGGCTTGATAATGATATAGTCTTGACATAGGCTTGATAATGATATAGCCTTGACATAGGCTTGATAATGATATAGCCTTGACATAGGATTGATAATGATATAGCCTTAACATAGGCTTGATAATGGTATAGCCTTGACATAGGCTTGATAATGATATAGTCTTGACATAGGCTTGATAATGATATAGCCTTGACATAGGCTTGATAATGATATAGTCTTGACATAGGCTTGATAATGATATAGCCTTGACATAGGCTTGATAATGGTATAGCCTTGACATAGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106584695

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU619590 True 362 lncRNA 0.35 2 76676497 76677048

Neighbor

gene id symbol gene type direction distance location
LOC118964933 chd9 coding upstream 56376 76604690 ~ 76620121 (+)
cylda LOC100380700 coding upstream 861266 75779416 ~ 75815231 (+)
nod2 nod2 coding upstream 911206 75752937 ~ 75765291 (+)
LOC110526967 LOC106587577 coding upstream 973895 75664369 ~ 75702602 (+)
LOC110526596 LOC106587576 coding upstream 1103594 75498696 ~ 75572903 (+)
LOC110526968 fto coding downstream 149953 76827001 ~ 77038395 (+)
irx5a irx5 coding downstream 818705 77495753 ~ 77499433 (+)
LOC110526613 LOC106587615 coding downstream 1046777 77723825 ~ 77730489 (+)
LOC110526614 mmp2 coding downstream 1137332 77814375 ~ 77847797 (+)
LOC110526615 pcat2 coding downstream 1171914 77848962 ~ 77866316 (+)
G547183 NA non-coding upstream 34505 76641431 ~ 76641992 (+)
G547239 chd9 non-coding upstream 47052 76626198 ~ 76629445 (+)
G547229 NA non-coding upstream 63512 76611408 ~ 76612985 (+)
G547163 NA non-coding upstream 152897 76522782 ~ 76523600 (+)
G547300 NA non-coding downstream 28576 76705624 ~ 76706152 (+)
G547303 NA non-coding downstream 33209 76710257 ~ 76710510 (+)
G547304 NA non-coding downstream 34166 76711214 ~ 76711438 (+)
G547305 NA non-coding downstream 34761 76711809 ~ 76712042 (+)
G547308 NA non-coding downstream 38705 76715753 ~ 76716148 (+)
G546464 LOC106562315 other upstream 705823 75928228 ~ 75970674 (+)
G545601 NA other upstream 1253745 75421861 ~ 75422752 (+)
G545485 NA other upstream 1438333 75237800 ~ 75238164 (+)
G544565 NA other upstream 2388359 74287778 ~ 74288138 (+)
LOC100136290 sox6 other upstream 3288810 73190979 ~ 73392251 (+)
G547884 NA other downstream 600944 77277992 ~ 77279354 (+)
G548000 NA other downstream 835561 77512609 ~ 77523423 (+)

Expression


Co-expression Network