G547303


Basic Information

Item Value
gene id G547303
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 76710257 ~ 76710510 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU619634
ctagacgaggtactatcacgaatatcctaccaacgggacatcaaaaactgcaatatcctatgtttcacagaatcgtggctgaatgaagacatggatattcagctagcgggatacatgctgcaccggcaggatataACAACGAGACGAGGggggggtctgtgcatatttgtaaacaacagctggtgcacacaATCTAAGgaagattttgctcgcctgaagatagtatattgtgataaattgcaggcctacttgcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU619634 True 254 lncRNA 0.45 1 76710257 76710510

Neighbor

gene id symbol gene type direction distance location
LOC118964933 chd9 coding upstream 90136 76604690 ~ 76620121 (+)
cylda LOC100380700 coding upstream 895026 75779416 ~ 75815231 (+)
nod2 nod2 coding upstream 944966 75752937 ~ 75765291 (+)
LOC110526967 LOC106587577 coding upstream 1007655 75664369 ~ 75702602 (+)
LOC110526596 LOC106587576 coding upstream 1137354 75498696 ~ 75572903 (+)
LOC110526968 fto coding downstream 116491 76827001 ~ 77038395 (+)
irx5a irx5 coding downstream 785243 77495753 ~ 77499433 (+)
LOC110526613 LOC106587615 coding downstream 1013315 77723825 ~ 77730489 (+)
LOC110526614 mmp2 coding downstream 1103870 77814375 ~ 77847797 (+)
LOC110526615 pcat2 coding downstream 1138452 77848962 ~ 77866316 (+)
G547300 NA non-coding upstream 4105 76705624 ~ 76706152 (+)
G547278 NA non-coding upstream 33209 76676497 ~ 76677048 (+)
G547183 NA non-coding upstream 68265 76641431 ~ 76641992 (+)
G547239 chd9 non-coding upstream 80812 76626198 ~ 76629445 (+)
G547304 NA non-coding downstream 704 76711214 ~ 76711438 (+)
G547305 NA non-coding downstream 1299 76711809 ~ 76712042 (+)
G547308 NA non-coding downstream 5243 76715753 ~ 76716148 (+)
G547312 NA non-coding downstream 9561 76720071 ~ 76720370 (+)
G547282 NA non-coding downstream 17446 76727956 ~ 76730368 (+)
G546464 LOC106562315 other upstream 739583 75928228 ~ 75970674 (+)
G545601 NA other upstream 1287505 75421861 ~ 75422752 (+)
G545485 NA other upstream 1472093 75237800 ~ 75238164 (+)
G544565 NA other upstream 2422119 74287778 ~ 74288138 (+)
LOC100136290 sox6 other upstream 3322570 73190979 ~ 73392251 (+)
G547884 NA other downstream 567482 77277992 ~ 77279354 (+)
G548000 NA other downstream 802099 77512609 ~ 77523423 (+)

Expression


Co-expression Network