Item | Value |
---|---|
gene id | G547514 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 76818961 ~ 76819231 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU619866 | True | 271 | lncRNA | 0.38 | 1 | 76818961 | 76819231 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118964933 | chd9 | coding | upstream | 198840 | 76604690 ~ 76620121 (+) |
cylda | LOC100380700 | coding | upstream | 1003730 | 75779416 ~ 75815231 (+) |
nod2 | nod2 | coding | upstream | 1053670 | 75752937 ~ 75765291 (+) |
LOC110526967 | LOC106587577 | coding | upstream | 1116359 | 75664369 ~ 75702602 (+) |
LOC110526596 | LOC106587576 | coding | upstream | 1246058 | 75498696 ~ 75572903 (+) |
LOC110526968 | fto | coding | downstream | 7770 | 76827001 ~ 77038395 (+) |
irx5a | irx5 | coding | downstream | 676522 | 77495753 ~ 77499433 (+) |
LOC110526613 | LOC106587615 | coding | downstream | 904594 | 77723825 ~ 77730489 (+) |
LOC110526614 | mmp2 | coding | downstream | 995149 | 77814375 ~ 77847797 (+) |
LOC110526615 | pcat2 | coding | downstream | 1029731 | 77848962 ~ 77866316 (+) |
G547455 | NA | non-coding | upstream | 47611 | 76771081 ~ 76771350 (+) |
G547419 | NA | non-coding | upstream | 69894 | 76745584 ~ 76749067 (+) |
G547418 | LOC106604990 | non-coding | upstream | 76559 | 76742139 ~ 76742402 (+) |
G547415 | NA | non-coding | upstream | 79440 | 76738710 ~ 76739521 (+) |
G547282 | NA | non-coding | upstream | 88593 | 76727956 ~ 76730368 (+) |
G547527 | NA | non-coding | downstream | 18417 | 76837648 ~ 76837856 (+) |
G547528 | NA | non-coding | downstream | 22269 | 76841500 ~ 76841975 (+) |
G547534 | NA | non-coding | downstream | 39661 | 76858892 ~ 76859126 (+) |
G547562 | NA | non-coding | downstream | 97251 | 76916482 ~ 76932885 (+) |
G546464 | LOC106562315 | other | upstream | 848287 | 75928228 ~ 75970674 (+) |
G545601 | NA | other | upstream | 1396209 | 75421861 ~ 75422752 (+) |
G545485 | NA | other | upstream | 1580797 | 75237800 ~ 75238164 (+) |
G544565 | NA | other | upstream | 2530823 | 74287778 ~ 74288138 (+) |
LOC100136290 | sox6 | other | upstream | 3431274 | 73190979 ~ 73392251 (+) |
G547884 | NA | other | downstream | 458761 | 77277992 ~ 77279354 (+) |
G548000 | NA | other | downstream | 693378 | 77512609 ~ 77523423 (+) |