G547528


Basic Information

Item Value
gene id G547528
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 76841500 ~ 76841975 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU619883
TTCACCTGGAGCTCATCAGTACCAACCATTCACCTGGAGCTCATCAGTACCATCCATTCACCTGGAGCTCATCAGTACCATCCATTCACCTGGAGCTCATCAGTACCAACCATTCACCTGGAACTCATCAGTACCAACCATTCACCTGGAGCCCATCAGTACCATTCACCTGGAGCTCATCAGTACCAACCATTCACCTGGAGCTCATCAGTACCAACCATTCACCTGGAGCTCATCAGTACCAACCATTCACCTGGAGCTCATCAGTACCATCCATTCACCTGGAGCTCATCAGCACCATTCACCTGGAGCTCATCAGTACCAACCATTCACCTGGAGCCCATCAGCACCATTCACCTGGAGCTCATCAGTACCAACCATTCACCTGGAGCTCATCAGTACCAACCATTCACCTGGAGCTCATCAGTACCAACCATTCACCTGGAACTCATCAGTACCAACCATTCACCTGGAGC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106587599

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU619883 True 476 lncRNA 0.51 1 76841500 76841975

Neighbor

gene id symbol gene type direction distance location
LOC118964933 chd9 coding upstream 221379 76604690 ~ 76620121 (+)
cylda LOC100380700 coding upstream 1026269 75779416 ~ 75815231 (+)
nod2 nod2 coding upstream 1076209 75752937 ~ 75765291 (+)
LOC110526967 LOC106587577 coding upstream 1138898 75664369 ~ 75702602 (+)
LOC110526596 LOC106587576 coding upstream 1268597 75498696 ~ 75572903 (+)
irx5a irx5 coding downstream 653778 77495753 ~ 77499433 (+)
LOC110526613 LOC106587615 coding downstream 881850 77723825 ~ 77730489 (+)
LOC110526614 mmp2 coding downstream 972405 77814375 ~ 77847797 (+)
LOC110526615 pcat2 coding downstream 1006987 77848962 ~ 77866316 (+)
LOC118965105 NA coding downstream 1121274 77963249 ~ 77963303 (+)
G547527 NA non-coding upstream 3644 76837648 ~ 76837856 (+)
G547514 NA non-coding upstream 22269 76818961 ~ 76819231 (+)
G547455 NA non-coding upstream 70150 76771081 ~ 76771350 (+)
G547419 NA non-coding upstream 92433 76745584 ~ 76749067 (+)
G547418 LOC106604990 non-coding upstream 99098 76742139 ~ 76742402 (+)
G547534 NA non-coding downstream 16917 76858892 ~ 76859126 (+)
LOC110526968 fto non-coding downstream 45604 76827001 ~ 77038395 (+)
G547562 NA non-coding downstream 74507 76916482 ~ 76932885 (+)
G547604 NA non-coding downstream 155176 76997151 ~ 76997761 (+)
G547621 NA non-coding downstream 179193 77021168 ~ 77022554 (+)
G546464 LOC106562315 other upstream 870826 75928228 ~ 75970674 (+)
G545601 NA other upstream 1418748 75421861 ~ 75422752 (+)
G545485 NA other upstream 1603336 75237800 ~ 75238164 (+)
G544565 NA other upstream 2553362 74287778 ~ 74288138 (+)
LOC100136290 sox6 other upstream 3453813 73190979 ~ 73392251 (+)
G547884 NA other downstream 436017 77277992 ~ 77279354 (+)
G548000 NA other downstream 670634 77512609 ~ 77523423 (+)

Expression


Co-expression Network