Gene
RNA
| Item | Value |
|---|---|
| gene id | G547534 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 76858892 ~ 76859126 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU619889 | True | 235 | lncRNA | 0.44 | 1 | 76858892 | 76859126 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964933 | chd9 | coding | upstream | 238771 | 76604690 ~ 76620121 (+) |
| cylda | LOC100380700 | coding | upstream | 1043661 | 75779416 ~ 75815231 (+) |
| nod2 | nod2 | coding | upstream | 1093601 | 75752937 ~ 75765291 (+) |
| LOC110526967 | LOC106587577 | coding | upstream | 1156290 | 75664369 ~ 75702602 (+) |
| LOC110526596 | LOC106587576 | coding | upstream | 1285989 | 75498696 ~ 75572903 (+) |
| irx5a | irx5 | coding | downstream | 636627 | 77495753 ~ 77499433 (+) |
| LOC110526613 | LOC106587615 | coding | downstream | 864699 | 77723825 ~ 77730489 (+) |
| LOC110526614 | mmp2 | coding | downstream | 955254 | 77814375 ~ 77847797 (+) |
| LOC110526615 | pcat2 | coding | downstream | 989836 | 77848962 ~ 77866316 (+) |
| LOC118965105 | NA | coding | downstream | 1104123 | 77963249 ~ 77963303 (+) |
| G547528 | NA | non-coding | upstream | 16917 | 76841500 ~ 76841975 (+) |
| G547527 | NA | non-coding | upstream | 21036 | 76837648 ~ 76837856 (+) |
| G547514 | NA | non-coding | upstream | 39661 | 76818961 ~ 76819231 (+) |
| G547455 | NA | non-coding | upstream | 87542 | 76771081 ~ 76771350 (+) |
| G547419 | NA | non-coding | upstream | 109825 | 76745584 ~ 76749067 (+) |
| LOC110526968 | fto | non-coding | downstream | 28453 | 76827001 ~ 77038395 (+) |
| G547562 | NA | non-coding | downstream | 57356 | 76916482 ~ 76932885 (+) |
| G547604 | NA | non-coding | downstream | 138025 | 76997151 ~ 76997761 (+) |
| G547621 | NA | non-coding | downstream | 162042 | 77021168 ~ 77022554 (+) |
| G547626 | NA | non-coding | downstream | 170633 | 77029759 ~ 77030948 (+) |
| G546464 | LOC106562315 | other | upstream | 888218 | 75928228 ~ 75970674 (+) |
| G545601 | NA | other | upstream | 1436140 | 75421861 ~ 75422752 (+) |
| G545485 | NA | other | upstream | 1620728 | 75237800 ~ 75238164 (+) |
| G544565 | NA | other | upstream | 2570754 | 74287778 ~ 74288138 (+) |
| LOC100136290 | sox6 | other | upstream | 3471205 | 73190979 ~ 73392251 (+) |
| G547884 | NA | other | downstream | 418866 | 77277992 ~ 77279354 (+) |
| G548000 | NA | other | downstream | 653483 | 77512609 ~ 77523423 (+) |
