G547884


Basic Information

Item Value
gene id G547884
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 77277992 ~ 77279354 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU620306
TACCTTATCTgtactagggttgcaaagggagatatattactggaaactttcaaACTACCAGTAAATTATCTGAATTTTTGGTATTTTTGGTAGCttttatgtaatctatcacaagacatctagtggccctaTAGGGTACTTAAGATGTCTGTATTTATCACTGAACCTCTGTGTGGCcgtatcacatgtaaaatatattaaatatataactaaatagctaacaaaatggctagaAGGACTATCTGAGTTGCCctttattttattcttatttttgcactgtctctatgcacactcacagggccctacattctatgcacactgacactccaacacacatacaaacactcactgacactccaacacacatacaaacacacactgatactccaacagacatacaaacacacactgatactccaacacacatacaaacacacactgatactccaacacacatacaaacactcactgatactccaacacacatacaaacactcactgatactccaacacacatacaaacactcactgatactccaacacacatacaaacacacactgatactccaacacacatacaaacactcactgaaactccaacacacatacaaacacacactgatactccaacacacatacaaacacacactgatacaccaacacacatacaaacactcactgatactccaacacacatacaaccacacactgatactccaacacacatacaaacacacactaatactccaacacacatacaaacactcactgatactccaacacacatacaaacacacactgatactccaacacacatacaaacactcactgatactcccacacacatacaaacactcactgatactacaacacacatacaaacactcactgatactccaacagacatacaaatacacactgattctccaacacacatacaaac

Function

NR:

description
PREDICTED: peroxisome proliferator-activated receptor gamma-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU620306 True 943 TUCP 0.38 3 77277992 77279354

Neighbor

gene id symbol gene type direction distance location
LOC110526968 fto coding upstream 239597 76827001 ~ 77038395 (+)
LOC118964933 chd9 coding upstream 657871 76604690 ~ 76620121 (+)
cylda LOC100380700 coding upstream 1462761 75779416 ~ 75815231 (+)
nod2 nod2 coding upstream 1512701 75752937 ~ 75765291 (+)
LOC110526967 LOC106587577 coding upstream 1575390 75664369 ~ 75702602 (+)
irx5a irx5 coding downstream 216399 77495753 ~ 77499433 (+)
LOC110526613 LOC106587615 coding downstream 444471 77723825 ~ 77730489 (+)
LOC110526614 mmp2 coding downstream 535026 77814375 ~ 77847797 (+)
LOC110526615 pcat2 coding downstream 569608 77848962 ~ 77866316 (+)
LOC118965105 NA coding downstream 683895 77963249 ~ 77963303 (+)
G547881 NA non-coding upstream 12179 77265578 ~ 77265813 (+)
G547845 NA non-coding upstream 65297 77212487 ~ 77212695 (+)
G547839 NA non-coding upstream 72616 77204991 ~ 77205376 (+)
G547835 NA non-coding upstream 89111 77188670 ~ 77188881 (+)
G547810 NA non-coding upstream 142646 77135137 ~ 77135346 (+)
G547892 NA non-coding downstream 27330 77306684 ~ 77308264 (+)
G547896 NA non-coding downstream 31050 77310404 ~ 77311043 (+)
G547962 NA non-coding downstream 154512 77433866 ~ 77434088 (+)
G547963 NA non-coding downstream 156805 77436159 ~ 77437031 (+)
G547980 NA non-coding downstream 200251 77479605 ~ 77479816 (+)
G546464 LOC106562315 other upstream 1307318 75928228 ~ 75970674 (+)
G545601 NA other upstream 1855240 75421861 ~ 75422752 (+)
G545485 NA other upstream 2039828 75237800 ~ 75238164 (+)
G544565 NA other upstream 2989854 74287778 ~ 74288138 (+)
G548000 NA other downstream 233255 77512609 ~ 77523423 (+)
G548703 NA other downstream 1141506 78420860 ~ 78496470 (+)
G549342 NA other downstream 1489902 78769256 ~ 78769907 (+)

Expression


Co-expression Network