Gene
RNA
| Item | Value |
|---|---|
| gene id | G547892 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 77306684 ~ 77308264 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU620316 | True | 202 | lncRNA | 0.38 | 2 | 77306684 | 77308264 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526968 | fto | coding | upstream | 268289 | 76827001 ~ 77038395 (+) |
| LOC118964933 | chd9 | coding | upstream | 686563 | 76604690 ~ 76620121 (+) |
| cylda | LOC100380700 | coding | upstream | 1491453 | 75779416 ~ 75815231 (+) |
| nod2 | nod2 | coding | upstream | 1541393 | 75752937 ~ 75765291 (+) |
| LOC110526967 | LOC106587577 | coding | upstream | 1604082 | 75664369 ~ 75702602 (+) |
| irx5a | irx5 | coding | downstream | 187489 | 77495753 ~ 77499433 (+) |
| LOC110526613 | LOC106587615 | coding | downstream | 415561 | 77723825 ~ 77730489 (+) |
| LOC110526614 | mmp2 | coding | downstream | 506116 | 77814375 ~ 77847797 (+) |
| LOC110526615 | pcat2 | coding | downstream | 540698 | 77848962 ~ 77866316 (+) |
| LOC118965105 | NA | coding | downstream | 654985 | 77963249 ~ 77963303 (+) |
| G547881 | NA | non-coding | upstream | 40871 | 77265578 ~ 77265813 (+) |
| G547845 | NA | non-coding | upstream | 93989 | 77212487 ~ 77212695 (+) |
| G547839 | NA | non-coding | upstream | 101308 | 77204991 ~ 77205376 (+) |
| G547835 | NA | non-coding | upstream | 117803 | 77188670 ~ 77188881 (+) |
| G547810 | NA | non-coding | upstream | 171338 | 77135137 ~ 77135346 (+) |
| G547896 | NA | non-coding | downstream | 2140 | 77310404 ~ 77311043 (+) |
| G547962 | NA | non-coding | downstream | 125602 | 77433866 ~ 77434088 (+) |
| G547963 | NA | non-coding | downstream | 127895 | 77436159 ~ 77437031 (+) |
| G547980 | NA | non-coding | downstream | 171341 | 77479605 ~ 77479816 (+) |
| G548024 | NA | non-coding | downstream | 238093 | 77546357 ~ 77548387 (+) |
| G547884 | NA | other | upstream | 27330 | 77277992 ~ 77279354 (+) |
| G546464 | LOC106562315 | other | upstream | 1336010 | 75928228 ~ 75970674 (+) |
| G545601 | NA | other | upstream | 1883932 | 75421861 ~ 75422752 (+) |
| G545485 | NA | other | upstream | 2068520 | 75237800 ~ 75238164 (+) |
| G548000 | NA | other | downstream | 204345 | 77512609 ~ 77523423 (+) |
| G548703 | NA | other | downstream | 1112596 | 78420860 ~ 78496470 (+) |
| G549342 | NA | other | downstream | 1460992 | 78769256 ~ 78769907 (+) |
