Item | Value |
---|---|
gene id | G548315 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 77649581 ~ 77649791 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU620818 | True | 211 | lncRNA | 0.42 | 1 | 77649581 | 77649791 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
irx5a | irx5 | coding | upstream | 150148 | 77495753 ~ 77499433 (+) |
LOC110526968 | fto | coding | upstream | 611186 | 76827001 ~ 77038395 (+) |
LOC118964933 | chd9 | coding | upstream | 1029460 | 76604690 ~ 76620121 (+) |
cylda | LOC100380700 | coding | upstream | 1834350 | 75779416 ~ 75815231 (+) |
nod2 | nod2 | coding | upstream | 1884290 | 75752937 ~ 75765291 (+) |
LOC110526613 | LOC106587615 | coding | downstream | 74034 | 77723825 ~ 77730489 (+) |
LOC110526614 | mmp2 | coding | downstream | 164589 | 77814375 ~ 77847797 (+) |
LOC110526615 | pcat2 | coding | downstream | 199171 | 77848962 ~ 77866316 (+) |
LOC118965105 | NA | coding | downstream | 313458 | 77963249 ~ 77963303 (+) |
LOC110526617 | LOC106562414 | coding | downstream | 318376 | 77968167 ~ 78042147 (+) |
G548033 | NA | non-coding | upstream | 80631 | 77568313 ~ 77568950 (+) |
G548024 | NA | non-coding | upstream | 101194 | 77546357 ~ 77548387 (+) |
G547980 | NA | non-coding | upstream | 169765 | 77479605 ~ 77479816 (+) |
G547963 | NA | non-coding | upstream | 212550 | 77436159 ~ 77437031 (+) |
G547962 | NA | non-coding | upstream | 215493 | 77433866 ~ 77434088 (+) |
G548317 | NA | non-coding | downstream | 1204 | 77650995 ~ 77651198 (+) |
G548347 | NA | non-coding | downstream | 32822 | 77682613 ~ 77682835 (+) |
G548441 | NA | non-coding | downstream | 122659 | 77772450 ~ 77778738 (+) |
G548442 | NA | non-coding | downstream | 125866 | 77775657 ~ 77778151 (+) |
G548457 | NA | non-coding | downstream | 162542 | 77812333 ~ 77812538 (+) |
G548000 | NA | other | upstream | 126158 | 77512609 ~ 77523423 (+) |
G547884 | NA | other | upstream | 370227 | 77277992 ~ 77279354 (+) |
G546464 | LOC106562315 | other | upstream | 1678907 | 75928228 ~ 75970674 (+) |
G545601 | NA | other | upstream | 2226829 | 75421861 ~ 75422752 (+) |
G548703 | NA | other | downstream | 771069 | 78420860 ~ 78496470 (+) |
G549342 | NA | other | downstream | 1119465 | 78769256 ~ 78769907 (+) |
G549345 | NA | other | downstream | 1122321 | 78772112 ~ 78772557 (+) |