Gene
RNA
| Item | Value |
|---|---|
| gene id | G548464 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 77817615 ~ 77817837 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU620979 | True | 223 | lncRNA | 0.45 | 1 | 77817615 | 77817837 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526613 | LOC106587615 | coding | upstream | 87126 | 77723825 ~ 77730489 (+) |
| irx5a | irx5 | coding | upstream | 318182 | 77495753 ~ 77499433 (+) |
| LOC110526968 | fto | coding | upstream | 779220 | 76827001 ~ 77038395 (+) |
| LOC118964933 | chd9 | coding | upstream | 1197494 | 76604690 ~ 76620121 (+) |
| cylda | LOC100380700 | coding | upstream | 2002384 | 75779416 ~ 75815231 (+) |
| LOC110526615 | pcat2 | coding | downstream | 31125 | 77848962 ~ 77866316 (+) |
| LOC118965105 | NA | coding | downstream | 145412 | 77963249 ~ 77963303 (+) |
| LOC110526617 | LOC106562414 | coding | downstream | 150330 | 77968167 ~ 78042147 (+) |
| LOC110525051 | LOC106587608 | coding | downstream | 269379 | 78087216 ~ 78088746 (+) |
| LOC110526620 | lt4r1 | coding | downstream | 271070 | 78088907 ~ 78090301 (+) |
| G548457 | NA | non-coding | upstream | 5077 | 77812333 ~ 77812538 (+) |
| G548441 | NA | non-coding | upstream | 38877 | 77772450 ~ 77778738 (+) |
| G548442 | NA | non-coding | upstream | 39464 | 77775657 ~ 77778151 (+) |
| G548347 | NA | non-coding | upstream | 134780 | 77682613 ~ 77682835 (+) |
| G548317 | NA | non-coding | upstream | 166417 | 77650995 ~ 77651198 (+) |
| G548466 | NA | non-coding | downstream | 9389 | 77827226 ~ 77827884 (+) |
| G548467 | NA | non-coding | downstream | 13060 | 77830897 ~ 77831676 (+) |
| G548472 | NA | non-coding | downstream | 38964 | 77856801 ~ 77857727 (+) |
| G548498 | NA | non-coding | downstream | 116241 | 77934078 ~ 77935551 (+) |
| LOC110526614 | mmp2 | other | upstream | 554 | 77814375 ~ 77847797 (+) |
| G548000 | NA | other | upstream | 294192 | 77512609 ~ 77523423 (+) |
| G547884 | NA | other | upstream | 538261 | 77277992 ~ 77279354 (+) |
| G546464 | LOC106562315 | other | upstream | 1846941 | 75928228 ~ 75970674 (+) |
| G548703 | NA | other | downstream | 603023 | 78420860 ~ 78496470 (+) |
| G549342 | NA | other | downstream | 951419 | 78769256 ~ 78769907 (+) |
| G549345 | NA | other | downstream | 954275 | 78772112 ~ 78772557 (+) |
| LOC110526645 | unc13c | other | downstream | 1333527 | 79089592 ~ 79354959 (+) |
