Gene
RNA
| Item | Value |
|---|---|
| gene id | G548467 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 77830897 ~ 77831676 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein EH28_07409 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU620982 | True | 693 | lncRNA | 0.43 | 2 | 77830897 | 77831676 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526613 | LOC106587615 | coding | upstream | 100408 | 77723825 ~ 77730489 (+) |
| irx5a | irx5 | coding | upstream | 331464 | 77495753 ~ 77499433 (+) |
| LOC110526968 | fto | coding | upstream | 792502 | 76827001 ~ 77038395 (+) |
| LOC118964933 | chd9 | coding | upstream | 1210776 | 76604690 ~ 76620121 (+) |
| cylda | LOC100380700 | coding | upstream | 2015666 | 75779416 ~ 75815231 (+) |
| LOC110526615 | pcat2 | coding | downstream | 17286 | 77848962 ~ 77866316 (+) |
| LOC118965105 | NA | coding | downstream | 131573 | 77963249 ~ 77963303 (+) |
| LOC110526617 | LOC106562414 | coding | downstream | 136491 | 77968167 ~ 78042147 (+) |
| LOC110525051 | LOC106587608 | coding | downstream | 255540 | 78087216 ~ 78088746 (+) |
| LOC110526620 | lt4r1 | coding | downstream | 257231 | 78088907 ~ 78090301 (+) |
| G548466 | NA | non-coding | upstream | 3013 | 77827226 ~ 77827884 (+) |
| G548464 | NA | non-coding | upstream | 13060 | 77817615 ~ 77817837 (+) |
| G548457 | NA | non-coding | upstream | 18359 | 77812333 ~ 77812538 (+) |
| G548441 | NA | non-coding | upstream | 52159 | 77772450 ~ 77778738 (+) |
| G548442 | NA | non-coding | upstream | 52746 | 77775657 ~ 77778151 (+) |
| G548472 | NA | non-coding | downstream | 25125 | 77856801 ~ 77857727 (+) |
| G548498 | NA | non-coding | downstream | 102402 | 77934078 ~ 77935551 (+) |
| G548570 | NA | non-coding | downstream | 285415 | 78117091 ~ 78117850 (+) |
| LOC110526621 | LOC106587617 | non-coding | downstream | 289113 | 78103895 ~ 78127426 (+) |
| LOC110526614 | mmp2 | other | upstream | 13836 | 77814375 ~ 77847797 (+) |
| G548000 | NA | other | upstream | 307474 | 77512609 ~ 77523423 (+) |
| G547884 | NA | other | upstream | 551543 | 77277992 ~ 77279354 (+) |
| G546464 | LOC106562315 | other | upstream | 1860223 | 75928228 ~ 75970674 (+) |
| G548703 | NA | other | downstream | 589184 | 78420860 ~ 78496470 (+) |
| G549342 | NA | other | downstream | 937580 | 78769256 ~ 78769907 (+) |
| G549345 | NA | other | downstream | 940436 | 78772112 ~ 78772557 (+) |
| LOC110526645 | unc13c | other | downstream | 1319688 | 79089592 ~ 79354959 (+) |
