Gene
RNA
| Item | Value |
|---|---|
| gene id | G548570 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 78117091 ~ 78117850 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU621123 | True | 256 | lncRNA | 0.43 | 2 | 78117091 | 78117850 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526620 | lt4r1 | coding | upstream | 26790 | 78088907 ~ 78090301 (+) |
| LOC110525051 | LOC106587608 | coding | upstream | 28345 | 78087216 ~ 78088746 (+) |
| LOC110526617 | LOC106562414 | coding | upstream | 74944 | 77968167 ~ 78042147 (+) |
| LOC118965105 | NA | coding | upstream | 153788 | 77963249 ~ 77963303 (+) |
| LOC110526615 | pcat2 | coding | upstream | 250775 | 77848962 ~ 77866316 (+) |
| LOC110526623 | LOC106587623 | coding | downstream | 102684 | 78220534 ~ 78224155 (+) |
| LOC110526624 | LOC105022628 | coding | downstream | 108513 | 78226363 ~ 78358769 (+) |
| LOC110526630 | LOC106562411 | coding | downstream | 248883 | 78366733 ~ 78379992 (+) |
| LOC110526629 | LOC106562410 | coding | downstream | 263534 | 78381384 ~ 78389020 (+) |
| LOC110526970 | LOC105022633 | coding | downstream | 271608 | 78389458 ~ 78477958 (+) |
| G548498 | NA | non-coding | upstream | 181540 | 77934078 ~ 77935551 (+) |
| G548472 | NA | non-coding | upstream | 259364 | 77856801 ~ 77857727 (+) |
| G548467 | NA | non-coding | upstream | 285415 | 77830897 ~ 77831676 (+) |
| G548466 | NA | non-coding | upstream | 289207 | 77827226 ~ 77827884 (+) |
| LOC110526621 | LOC106587617 | non-coding | downstream | 2939 | 78103895 ~ 78127426 (+) |
| G548573 | NA | non-coding | downstream | 10343 | 78128193 ~ 78188167 (+) |
| G548642 | NA | non-coding | downstream | 129886 | 78247736 ~ 78248253 (+) |
| G548629 | NA | non-coding | downstream | 234158 | 78352008 ~ 78409500 (+) |
| G548788 | NA | non-coding | downstream | 423443 | 78541293 ~ 78541498 (+) |
| LOC110526614 | mmp2 | other | upstream | 300030 | 77814375 ~ 77847797 (+) |
| G548000 | NA | other | upstream | 593668 | 77512609 ~ 77523423 (+) |
| G547884 | NA | other | upstream | 837737 | 77277992 ~ 77279354 (+) |
| LOC110526968 | fto | other | upstream | 1080778 | 76827001 ~ 77038395 (+) |
| G548703 | NA | other | downstream | 303010 | 78420860 ~ 78496470 (+) |
| G549342 | NA | other | downstream | 651406 | 78769256 ~ 78769907 (+) |
| G549345 | NA | other | downstream | 654262 | 78772112 ~ 78772557 (+) |
| LOC110526645 | unc13c | other | downstream | 1033514 | 79089592 ~ 79354959 (+) |
| G550054 | NA | other | downstream | 1361631 | 79479481 ~ 79480078 (+) |
