G548703


Basic Information

Item Value
gene id G548703
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 78420860 ~ 78496470 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU621269
tgttttttcatagttttgatgtcttcactattattctacaatgtattcattccattattttacttttagatttgtgtgtattgttgtaaattgttagatattactgcactctaggaacacaagcatttcgctacactccaATAACATCagctgctaaatatgtgtatgtgaccaatacaatttagacctgttgtgacatataacttcacactcaatgtcaacaaaacaaaggagatgatcgtggacttcaggaaacagcagagggagcatccccctatccacatcgatgggacaggtgtggagaaggtggaaagttttaagtttcttggcgtacacatcacagacaaactgaattggtccacccacacagacagcatcgtgaagaaggcacagcatcgcctcttcaacctcaggaggctgaagaaatttggcttgtcaccaaaaacactcacaaacctttacagatgcacaatcgagagcatcctgtcggactgtatccccgcctggtacggcaactgctccgcccacaaccgtaagtctctccagagggtagtgacgtctgcacaacacatcaccgggggcaaactacctgccctccaggacacctacaccacccgatgtcacaggaaggccactaagatcatcaaggacaacaaccatccgagccactgcctgttcaccccgctatcatccagaaggcgaggtcagtacaggtgcatcaaagctgggaccgagagactgaaaaacagcttctatctcaaggccatcagactgttaaacagcaaccact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU621269 True 790 TUCP 0.46 2 78420860 78496470

Neighbor

gene id symbol gene type direction distance location
LOC110526629 LOC106562410 coding upstream 31840 78381384 ~ 78389020 (+)
LOC110526630 LOC106562411 coding upstream 40868 78366733 ~ 78379992 (+)
LOC110526624 LOC105022628 coding upstream 62091 78226363 ~ 78358769 (+)
LOC110526623 LOC106587623 coding upstream 196705 78220534 ~ 78224155 (+)
LOC110526621 LOC106587617 coding upstream 293434 78103895 ~ 78127426 (+)
LOC110526639 LOC106587637 coding downstream 6480 78502950 ~ 78511984 (+)
LOC110526640 LOC106562467 coding downstream 160640 78657110 ~ 78676158 (+)
LOC110506124 LOC101474724 coding downstream 267137 78763607 ~ 78909743 (+)
LOC110526645 unc13c coding downstream 593122 79089592 ~ 79354959 (+)
LOC110506775 LOC106562487 coding downstream 1028339 79524809 ~ 79531505 (+)
G548629 NA non-coding upstream 11360 78352008 ~ 78409500 (+)
G548642 NA non-coding upstream 172607 78247736 ~ 78248253 (+)
G548573 NA non-coding upstream 232693 78128193 ~ 78188167 (+)
G548570 NA non-coding upstream 303010 78117091 ~ 78117850 (+)
G548788 NA non-coding downstream 44823 78541293 ~ 78541498 (+)
G549207 NA non-coding downstream 50834 78547304 ~ 78547608 (+)
G549214 NA non-coding downstream 57028 78553498 ~ 78553802 (+)
G549224 NA non-coding downstream 67657 78564127 ~ 78564333 (+)
G549227 NA non-coding downstream 70880 78567350 ~ 78567580 (+)
LOC110526615 pcat2 other upstream 554992 77848962 ~ 77866316 (+)
LOC110526614 mmp2 other upstream 603799 77814375 ~ 77847797 (+)
G548000 NA other upstream 897437 77512609 ~ 77523423 (+)
G547884 NA other upstream 1141506 77277992 ~ 77279354 (+)
LOC110526968 fto other upstream 1384547 76827001 ~ 77038395 (+)
G549342 NA other downstream 272786 78769256 ~ 78769907 (+)
G549345 NA other downstream 275642 78772112 ~ 78772557 (+)
G550054 NA other downstream 983011 79479481 ~ 79480078 (+)
LOC118936661 LOC106592882 other downstream 1075409 79571838 ~ 79577990 (+)

Expression


Co-expression Network