Gene
RNA
| Item | Value |
|---|---|
| gene id | G549272 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 78650178 ~ 78650401 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU621894 | True | 224 | lncRNA | 0.50 | 1 | 78650178 | 78650401 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526639 | LOC106587637 | coding | upstream | 138194 | 78502950 ~ 78511984 (+) |
| LOC110526970 | LOC105022633 | coding | upstream | 172220 | 78389458 ~ 78477958 (+) |
| LOC110526629 | LOC106562410 | coding | upstream | 261158 | 78381384 ~ 78389020 (+) |
| LOC110526630 | LOC106562411 | coding | upstream | 270186 | 78366733 ~ 78379992 (+) |
| LOC110526624 | LOC105022628 | coding | upstream | 291409 | 78226363 ~ 78358769 (+) |
| LOC110526640 | LOC106562467 | coding | downstream | 6709 | 78657110 ~ 78676158 (+) |
| LOC110506124 | LOC101474724 | coding | downstream | 113206 | 78763607 ~ 78909743 (+) |
| LOC110526645 | unc13c | coding | downstream | 439191 | 79089592 ~ 79354959 (+) |
| LOC110506775 | LOC106562487 | coding | downstream | 874408 | 79524809 ~ 79531505 (+) |
| LOC110506774 | LOC106587663 | coding | downstream | 892678 | 79543079 ~ 79570938 (+) |
| G549271 | NA | non-coding | upstream | 8715 | 78641259 ~ 78641463 (+) |
| G549247 | NA | non-coding | upstream | 66734 | 78583159 ~ 78583444 (+) |
| G549229 | NA | non-coding | upstream | 81484 | 78567767 ~ 78568694 (+) |
| G549227 | NA | non-coding | upstream | 82598 | 78567350 ~ 78567580 (+) |
| G549224 | NA | non-coding | upstream | 85845 | 78564127 ~ 78564333 (+) |
| G549280 | NA | non-coding | downstream | 29539 | 78679940 ~ 78683378 (+) |
| G549296 | NA | non-coding | downstream | 34886 | 78685287 ~ 78685488 (+) |
| G549297 | NA | non-coding | downstream | 37940 | 78688341 ~ 78688628 (+) |
| G549298 | NA | non-coding | downstream | 38271 | 78688672 ~ 78688894 (+) |
| G548703 | NA | other | upstream | 153708 | 78420860 ~ 78496470 (+) |
| LOC110526615 | pcat2 | other | upstream | 784310 | 77848962 ~ 77866316 (+) |
| LOC110526614 | mmp2 | other | upstream | 833117 | 77814375 ~ 77847797 (+) |
| G548000 | NA | other | upstream | 1126755 | 77512609 ~ 77523423 (+) |
| G547884 | NA | other | upstream | 1370824 | 77277992 ~ 77279354 (+) |
| G549342 | NA | other | downstream | 118855 | 78769256 ~ 78769907 (+) |
| G549345 | NA | other | downstream | 121711 | 78772112 ~ 78772557 (+) |
| G550054 | NA | other | downstream | 829080 | 79479481 ~ 79480078 (+) |
| LOC118936661 | LOC106592882 | other | downstream | 921478 | 79571838 ~ 79577990 (+) |
