Gene
RNA
| Item | Value |
|---|---|
| gene id | G549340 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 78766395 ~ 78766632 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU621972 | True | 238 | lncRNA | 0.43 | 1 | 78766395 | 78766632 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526640 | LOC106562467 | coding | upstream | 90237 | 78657110 ~ 78676158 (+) |
| LOC110526639 | LOC106587637 | coding | upstream | 254411 | 78502950 ~ 78511984 (+) |
| LOC110526970 | LOC105022633 | coding | upstream | 288437 | 78389458 ~ 78477958 (+) |
| LOC110526629 | LOC106562410 | coding | upstream | 377375 | 78381384 ~ 78389020 (+) |
| LOC110526630 | LOC106562411 | coding | upstream | 386403 | 78366733 ~ 78379992 (+) |
| LOC110526645 | unc13c | coding | downstream | 322960 | 79089592 ~ 79354959 (+) |
| LOC110506775 | LOC106562487 | coding | downstream | 758177 | 79524809 ~ 79531505 (+) |
| LOC110506774 | LOC106587663 | coding | downstream | 776447 | 79543079 ~ 79570938 (+) |
| LOC118936661 | LOC106592882 | coding | downstream | 805206 | 79571838 ~ 79577990 (+) |
| LOC110511859 | myo5a | coding | downstream | 811890 | 79578522 ~ 79671531 (+) |
| G549307 | NA | non-coding | upstream | 62182 | 78703290 ~ 78704213 (+) |
| G549304 | NA | non-coding | upstream | 64757 | 78701355 ~ 78701638 (+) |
| G549298 | NA | non-coding | upstream | 77501 | 78688672 ~ 78688894 (+) |
| G549297 | NA | non-coding | upstream | 77767 | 78688341 ~ 78688628 (+) |
| G549296 | NA | non-coding | upstream | 80907 | 78685287 ~ 78685488 (+) |
| G549344 | NA | non-coding | downstream | 4597 | 78771229 ~ 78771716 (+) |
| G549348 | NA | non-coding | downstream | 8639 | 78775271 ~ 78775505 (+) |
| G549352 | NA | non-coding | downstream | 19482 | 78786114 ~ 78786335 (+) |
| G549353 | NA | non-coding | downstream | 19918 | 78786550 ~ 78786809 (+) |
| G549354 | NA | non-coding | downstream | 25330 | 78791962 ~ 78798188 (+) |
| G548703 | NA | other | upstream | 269925 | 78420860 ~ 78496470 (+) |
| LOC110526615 | pcat2 | other | upstream | 900527 | 77848962 ~ 77866316 (+) |
| LOC110526614 | mmp2 | other | upstream | 949334 | 77814375 ~ 77847797 (+) |
| G548000 | NA | other | upstream | 1242972 | 77512609 ~ 77523423 (+) |
| G547884 | NA | other | upstream | 1487041 | 77277992 ~ 77279354 (+) |
| G549342 | NA | other | downstream | 2624 | 78769256 ~ 78769907 (+) |
| G549345 | NA | other | downstream | 5480 | 78772112 ~ 78772557 (+) |
| G550054 | NA | other | downstream | 712849 | 79479481 ~ 79480078 (+) |
