Gene
RNA
| Item | Value |
|---|---|
| gene id | G549354 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 78791962 ~ 78798188 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU621986 | True | 231 | lncRNA | 0.37 | 3 | 78791962 | 78798188 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526640 | LOC106562467 | coding | upstream | 115804 | 78657110 ~ 78676158 (+) |
| LOC110526639 | LOC106587637 | coding | upstream | 279978 | 78502950 ~ 78511984 (+) |
| LOC110526970 | LOC105022633 | coding | upstream | 314004 | 78389458 ~ 78477958 (+) |
| LOC110526629 | LOC106562410 | coding | upstream | 402942 | 78381384 ~ 78389020 (+) |
| LOC110526630 | LOC106562411 | coding | upstream | 411970 | 78366733 ~ 78379992 (+) |
| LOC110526645 | unc13c | coding | downstream | 291404 | 79089592 ~ 79354959 (+) |
| LOC110506775 | LOC106562487 | coding | downstream | 726621 | 79524809 ~ 79531505 (+) |
| LOC110506774 | LOC106587663 | coding | downstream | 744891 | 79543079 ~ 79570938 (+) |
| LOC118936661 | LOC106592882 | coding | downstream | 773650 | 79571838 ~ 79577990 (+) |
| LOC110511859 | myo5a | coding | downstream | 780334 | 79578522 ~ 79671531 (+) |
| G549353 | NA | non-coding | upstream | 5153 | 78786550 ~ 78786809 (+) |
| G549352 | NA | non-coding | upstream | 5627 | 78786114 ~ 78786335 (+) |
| G549348 | NA | non-coding | upstream | 16457 | 78775271 ~ 78775505 (+) |
| G549344 | NA | non-coding | upstream | 20246 | 78771229 ~ 78771716 (+) |
| G549340 | NA | non-coding | upstream | 25330 | 78766395 ~ 78766632 (+) |
| G549362 | NA | non-coding | downstream | 14896 | 78813084 ~ 78813311 (+) |
| G549368 | NA | non-coding | downstream | 24576 | 78822764 ~ 78822982 (+) |
| G549370 | LOC105030512 | non-coding | downstream | 46746 | 78844934 ~ 78849785 (+) |
| G549405 | NA | non-coding | downstream | 109507 | 78907695 ~ 78907962 (+) |
| LOC110506124 | LOC101474724 | non-coding | downstream | 110286 | 78763607 ~ 78909743 (+) |
| G549345 | NA | other | upstream | 19405 | 78772112 ~ 78772557 (+) |
| G549342 | NA | other | upstream | 22055 | 78769256 ~ 78769907 (+) |
| G548703 | NA | other | upstream | 295492 | 78420860 ~ 78496470 (+) |
| LOC110526615 | pcat2 | other | upstream | 926094 | 77848962 ~ 77866316 (+) |
| LOC110526614 | mmp2 | other | upstream | 974901 | 77814375 ~ 77847797 (+) |
| G550054 | NA | other | downstream | 681293 | 79479481 ~ 79480078 (+) |
| G550265 | NA | other | downstream | 1270560 | 80068748 ~ 80069285 (+) |
| G550305 | NA | other | downstream | 1401982 | 80200170 ~ 80200529 (+) |
