G550054



Basic Information


Item Value
gene id G550054
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 79479481 ~ 79480078 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU622771
GATAGTTCAGAtggacaacacagcttcaaacacaccaaggttctggatcctgccaggtctcctcactgcggtctccttagagacagttcagatggacaacacagcttcaaacacaccaaggttctggatcctgccaggtctcctcactgcggtctccttagagacagttcagatggacaacacagcttcaaacacaccaaggttctggaaCCTGCCAGATCTCCTCACTGCGGTCTCCTTAgagacagttcagacagacaacacagcttcaaacacaccaaggttctggaacctgccaggtctcctcactgTGCTCTCCAtagagacagttcagatggacaacacagcttcaaacacaccaaggttctggaacctgccaggtctcctcactgTGCTCTCAAtagagacagttcagatggacaacacagcttcaaacacaccaaggttctggaTCCTGCCAGGTCTCCTCACCGTGCTCTCCttagagacagttcagatggacaacacagcttcaaac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU622771 True 517 TUCP 0.50 2 79479481 79480078

Neighbor


gene id symbol gene type direction distance location
LOC110526645 unc13c coding upstream 124522 79089592 ~ 79354959 (+)
LOC110506124 LOC101474724 coding upstream 570144 78763607 ~ 78909743 (+)
LOC110526640 LOC106562467 coding upstream 803323 78657110 ~ 78676158 (+)
LOC110526639 LOC106587637 coding upstream 967497 78502950 ~ 78511984 (+)
LOC110526970 LOC105022633 coding upstream 1001523 78389458 ~ 78477958 (+)
LOC110506775 LOC106562487 coding downstream 44731 79524809 ~ 79531505 (+)
LOC110506774 LOC106587663 coding downstream 63001 79543079 ~ 79570938 (+)
LOC118936661 LOC106592882 coding downstream 91760 79571838 ~ 79577990 (+)
LOC110511859 myo5a coding downstream 98444 79578522 ~ 79671531 (+)
LOC110526647 LOC106562494 coding downstream 191951 79672029 ~ 79699222 (+)
G550051 NA non-coding upstream 1552 79477656 ~ 79477929 (+)
G550005 NA non-coding upstream 48673 79420055 ~ 79430808 (+)
G550000 NA non-coding upstream 63470 79415799 ~ 79416011 (+)
G549997 NA non-coding upstream 64989 79414282 ~ 79414492 (+)
G549992 NA non-coding upstream 66539 79412624 ~ 79412942 (+)
G550064 NA non-coding downstream 5050 79485128 ~ 79489075 (+)
G550071 NA non-coding downstream 15354 79495432 ~ 79495635 (+)
G550098 NA non-coding downstream 42025 79522103 ~ 79523446 (+)
G550099 NA non-coding downstream 43456 79523534 ~ 79523843 (+)
G549345 NA other upstream 706924 78772112 ~ 78772557 (+)
G549342 NA other upstream 709574 78769256 ~ 78769907 (+)
G548703 NA other upstream 983011 78420860 ~ 78496470 (+)
LOC110526615 pcat2 other upstream 1613613 77848962 ~ 77866316 (+)
G550265 NA other downstream 588670 80068748 ~ 80069285 (+)
G550305 NA other downstream 720092 80200170 ~ 80200529 (+)
myef2 myef2 other downstream 935369 80415414 ~ 80430972 (+)
G551043 NA other downstream 1440629 80920707 ~ 80921436 (+)

Expression



Co-expression Network