Gene
RNA
| Item | Value |
|---|---|
| gene id | G550171 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 79791837 ~ 79792072 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU622906 | True | 236 | lncRNA | 0.49 | 1 | 79791837 | 79792072 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526648 | LOC106587674 | coding | upstream | 86233 | 79699361 ~ 79705604 (+) |
| LOC110526647 | LOC106562494 | coding | upstream | 92615 | 79672029 ~ 79699222 (+) |
| LOC110511859 | myo5a | coding | upstream | 120306 | 79578522 ~ 79671531 (+) |
| LOC118936661 | LOC106592882 | coding | upstream | 213847 | 79571838 ~ 79577990 (+) |
| LOC110506774 | LOC106587663 | coding | upstream | 220899 | 79543079 ~ 79570938 (+) |
| nrk2 | LOC106562430 | coding | downstream | 65364 | 79857436 ~ 79860739 (+) |
| LOC110514990 | LOC106587684 | coding | downstream | 95442 | 79887514 ~ 79898351 (+) |
| LOC110506133 | LOC106562504 | coding | downstream | 127891 | 79919963 ~ 79942131 (+) |
| LOC118965045 | LOC106562464 | coding | downstream | 162727 | 79954799 ~ 80064775 (+) |
| LOC110506137 | LOC106587708 | coding | downstream | 301401 | 80093473 ~ 80106535 (+) |
| G550167 | NA | non-coding | upstream | 13300 | 79778280 ~ 79778537 (+) |
| G550166 | NA | non-coding | upstream | 18165 | 79768013 ~ 79773672 (+) |
| G550164 | LOC100846954 | non-coding | upstream | 29161 | 79762103 ~ 79762676 (+) |
| G550162 | NA | non-coding | upstream | 40314 | 79750289 ~ 79751523 (+) |
| G550084 | trpm7 | non-coding | upstream | 43266 | 79744995 ~ 79748571 (+) |
| G550192 | NA | non-coding | downstream | 47903 | 79839975 ~ 79840184 (+) |
| G550195 | NA | non-coding | downstream | 59094 | 79851166 ~ 79851365 (+) |
| G550212 | NA | non-coding | downstream | 89782 | 79881854 ~ 79882692 (+) |
| G550222 | NA | non-coding | downstream | 152648 | 79944720 ~ 79945040 (+) |
| G550223 | NA | non-coding | downstream | 155689 | 79947761 ~ 79948588 (+) |
| G550054 | NA | other | upstream | 311759 | 79479481 ~ 79480078 (+) |
| LOC110526645 | unc13c | other | upstream | 628806 | 79089592 ~ 79354959 (+) |
| G549345 | NA | other | upstream | 1019280 | 78772112 ~ 78772557 (+) |
| G549342 | NA | other | upstream | 1021930 | 78769256 ~ 78769907 (+) |
| G550265 | NA | other | downstream | 276676 | 80068748 ~ 80069285 (+) |
| G550305 | NA | other | downstream | 408098 | 80200170 ~ 80200529 (+) |
| myef2 | myef2 | other | downstream | 623375 | 80415414 ~ 80430972 (+) |
| G551043 | NA | other | downstream | 1128635 | 80920707 ~ 80921436 (+) |
| LOC110526107 | scg3 | other | downstream | 1661424 | 81435094 ~ 81466198 (+) |
