G550192


Basic Information

Item Value
gene id G550192
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 79839975 ~ 79840184 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU622928
TCTCTGGTTTGTGAGTCAAATGTCAAAGTCATGCCAGATGACAGTGGTAGAATCTAATTGCATACTCCTTGCGTCCTTTCCTCGACTCCTCAAAatccattggatgagaaagcccaGGGTCCCtactctctgaccttctccaatgGGATTTGTGTGGACAAGATTTTCTCCTTGTCCACATATTGACCATGTAAGGGGGTAAGTGTTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU622928 True 210 lncRNA 0.44 1 79839975 79840184

Neighbor

gene id symbol gene type direction distance location
LOC110526648 LOC106587674 coding upstream 134371 79699361 ~ 79705604 (+)
LOC110526647 LOC106562494 coding upstream 140753 79672029 ~ 79699222 (+)
LOC110511859 myo5a coding upstream 168444 79578522 ~ 79671531 (+)
LOC118936661 LOC106592882 coding upstream 261985 79571838 ~ 79577990 (+)
LOC110506774 LOC106587663 coding upstream 269037 79543079 ~ 79570938 (+)
nrk2 LOC106562430 coding downstream 17252 79857436 ~ 79860739 (+)
LOC110514990 LOC106587684 coding downstream 47330 79887514 ~ 79898351 (+)
LOC110506133 LOC106562504 coding downstream 79779 79919963 ~ 79942131 (+)
LOC118965045 LOC106562464 coding downstream 114615 79954799 ~ 80064775 (+)
LOC110506137 LOC106587708 coding downstream 253289 80093473 ~ 80106535 (+)
G550171 NA non-coding upstream 47903 79791837 ~ 79792072 (+)
G550167 NA non-coding upstream 61438 79778280 ~ 79778537 (+)
G550166 NA non-coding upstream 66303 79768013 ~ 79773672 (+)
G550164 LOC100846954 non-coding upstream 77299 79762103 ~ 79762676 (+)
G550162 NA non-coding upstream 88452 79750289 ~ 79751523 (+)
G550195 NA non-coding downstream 10982 79851166 ~ 79851365 (+)
G550212 NA non-coding downstream 41670 79881854 ~ 79882692 (+)
G550222 NA non-coding downstream 104536 79944720 ~ 79945040 (+)
G550223 NA non-coding downstream 107577 79947761 ~ 79948588 (+)
G550284 NA non-coding downstream 244251 80084435 ~ 80084712 (+)
G550054 NA other upstream 359897 79479481 ~ 79480078 (+)
LOC110526645 unc13c other upstream 676944 79089592 ~ 79354959 (+)
G549345 NA other upstream 1067418 78772112 ~ 78772557 (+)
G549342 NA other upstream 1070068 78769256 ~ 78769907 (+)
G550265 NA other downstream 228564 80068748 ~ 80069285 (+)
G550305 NA other downstream 359986 80200170 ~ 80200529 (+)
myef2 myef2 other downstream 575263 80415414 ~ 80430972 (+)
G551043 NA other downstream 1080523 80920707 ~ 80921436 (+)
LOC110526107 scg3 other downstream 1613312 81435094 ~ 81466198 (+)

Expression


Co-expression Network