Gene
RNA
| Item | Value |
|---|---|
| gene id | G550212 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 79881854 ~ 79882692 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU622949 | True | 626 | lncRNA | 0.41 | 4 | 79881854 | 79882692 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nrk2 | LOC106562430 | coding | upstream | 21115 | 79857436 ~ 79860739 (+) |
| LOC110526648 | LOC106587674 | coding | upstream | 176250 | 79699361 ~ 79705604 (+) |
| LOC110526647 | LOC106562494 | coding | upstream | 182632 | 79672029 ~ 79699222 (+) |
| LOC110511859 | myo5a | coding | upstream | 210323 | 79578522 ~ 79671531 (+) |
| LOC118936661 | LOC106592882 | coding | upstream | 303864 | 79571838 ~ 79577990 (+) |
| LOC110514990 | LOC106587684 | coding | downstream | 4822 | 79887514 ~ 79898351 (+) |
| LOC110506133 | LOC106562504 | coding | downstream | 37271 | 79919963 ~ 79942131 (+) |
| LOC118965045 | LOC106562464 | coding | downstream | 72107 | 79954799 ~ 80064775 (+) |
| LOC110506137 | LOC106587708 | coding | downstream | 210781 | 80093473 ~ 80106535 (+) |
| LOC110506794 | LOC106596910 | coding | downstream | 225863 | 80108555 ~ 80147068 (+) |
| G550195 | NA | non-coding | upstream | 30489 | 79851166 ~ 79851365 (+) |
| G550192 | NA | non-coding | upstream | 41670 | 79839975 ~ 79840184 (+) |
| G550171 | NA | non-coding | upstream | 89782 | 79791837 ~ 79792072 (+) |
| G550167 | NA | non-coding | upstream | 103317 | 79778280 ~ 79778537 (+) |
| G550166 | NA | non-coding | upstream | 108182 | 79768013 ~ 79773672 (+) |
| G550222 | NA | non-coding | downstream | 62028 | 79944720 ~ 79945040 (+) |
| G550223 | NA | non-coding | downstream | 65069 | 79947761 ~ 79948588 (+) |
| G550284 | NA | non-coding | downstream | 201743 | 80084435 ~ 80084712 (+) |
| G550286 | NA | non-coding | downstream | 205146 | 80087838 ~ 80088156 (+) |
| G550288 | NA | non-coding | downstream | 207467 | 80090159 ~ 80090435 (+) |
| G550054 | NA | other | upstream | 401776 | 79479481 ~ 79480078 (+) |
| LOC110526645 | unc13c | other | upstream | 718823 | 79089592 ~ 79354959 (+) |
| G549345 | NA | other | upstream | 1109297 | 78772112 ~ 78772557 (+) |
| G549342 | NA | other | upstream | 1111947 | 78769256 ~ 78769907 (+) |
| G550265 | NA | other | downstream | 186056 | 80068748 ~ 80069285 (+) |
| G550305 | NA | other | downstream | 317478 | 80200170 ~ 80200529 (+) |
| myef2 | myef2 | other | downstream | 532755 | 80415414 ~ 80430972 (+) |
| G551043 | NA | other | downstream | 1038015 | 80920707 ~ 80921436 (+) |
| LOC110526107 | scg3 | other | downstream | 1570804 | 81435094 ~ 81466198 (+) |
