Gene
RNA
| Item | Value |
|---|---|
| gene id | G550223 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 79947761 ~ 79948588 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: DTW domain-containing protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU622964 | True | 828 | lncRNA | 0.53 | 1 | 79947761 | 79948588 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506133 | LOC106562504 | coding | upstream | 5630 | 79919963 ~ 79942131 (+) |
| LOC110514990 | LOC106587684 | coding | upstream | 49410 | 79887514 ~ 79898351 (+) |
| nrk2 | LOC106562430 | coding | upstream | 87022 | 79857436 ~ 79860739 (+) |
| LOC110526648 | LOC106587674 | coding | upstream | 242157 | 79699361 ~ 79705604 (+) |
| LOC110526647 | LOC106562494 | coding | upstream | 248539 | 79672029 ~ 79699222 (+) |
| LOC118965045 | LOC106562464 | coding | downstream | 6211 | 79954799 ~ 80064775 (+) |
| LOC110506137 | LOC106587708 | coding | downstream | 144885 | 80093473 ~ 80106535 (+) |
| LOC110506794 | LOC106596910 | coding | downstream | 159967 | 80108555 ~ 80147068 (+) |
| LOC110526764 | fbn1 | coding | downstream | 217595 | 80166183 ~ 80317535 (+) |
| LOC110506798 | NA | coding | downstream | 376409 | 80324997 ~ 80326381 (+) |
| G550222 | NA | non-coding | upstream | 2721 | 79944720 ~ 79945040 (+) |
| G550212 | NA | non-coding | upstream | 65069 | 79881854 ~ 79882692 (+) |
| G550195 | NA | non-coding | upstream | 96396 | 79851166 ~ 79851365 (+) |
| G550192 | NA | non-coding | upstream | 107577 | 79839975 ~ 79840184 (+) |
| G550171 | NA | non-coding | upstream | 155689 | 79791837 ~ 79792072 (+) |
| G550284 | NA | non-coding | downstream | 135847 | 80084435 ~ 80084712 (+) |
| G550286 | NA | non-coding | downstream | 139250 | 80087838 ~ 80088156 (+) |
| G550288 | NA | non-coding | downstream | 141571 | 80090159 ~ 80090435 (+) |
| G550276 | NA | non-coding | downstream | 180336 | 80128924 ~ 80129152 (+) |
| LOC118936661 | LOC106592882 | other | upstream | 369771 | 79571838 ~ 79577990 (+) |
| G550054 | NA | other | upstream | 467683 | 79479481 ~ 79480078 (+) |
| LOC110526645 | unc13c | other | upstream | 784730 | 79089592 ~ 79354959 (+) |
| G549345 | NA | other | upstream | 1175204 | 78772112 ~ 78772557 (+) |
| G549342 | NA | other | upstream | 1177854 | 78769256 ~ 78769907 (+) |
| G550265 | NA | other | downstream | 120160 | 80068748 ~ 80069285 (+) |
| G550305 | NA | other | downstream | 251582 | 80200170 ~ 80200529 (+) |
| myef2 | myef2 | other | downstream | 466859 | 80415414 ~ 80430972 (+) |
| G551043 | NA | other | downstream | 972119 | 80920707 ~ 80921436 (+) |
| LOC110526107 | scg3 | other | downstream | 1504908 | 81435094 ~ 81466198 (+) |
