Gene
RNA
| Item | Value |
|---|---|
| gene id | G550329 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 80289391 ~ 80289783 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU623088 | True | 213 | lncRNA | 0.54 | 2 | 80289391 | 80289783 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506794 | LOC106596910 | coding | upstream | 142323 | 80108555 ~ 80147068 (+) |
| LOC110506137 | LOC106587708 | coding | upstream | 182856 | 80093473 ~ 80106535 (+) |
| LOC118965045 | LOC106562464 | coding | upstream | 224616 | 79954799 ~ 80064775 (+) |
| LOC110506133 | LOC106562504 | coding | upstream | 347260 | 79919963 ~ 79942131 (+) |
| LOC110514990 | LOC106587684 | coding | upstream | 391040 | 79887514 ~ 79898351 (+) |
| LOC110506798 | NA | coding | downstream | 35214 | 80324997 ~ 80326381 (+) |
| myef2 | myef2 | coding | downstream | 125631 | 80415414 ~ 80430972 (+) |
| LOC110516752 | NA | coding | downstream | 188036 | 80477819 ~ 80479832 (+) |
| LOC110506811 | LOC106562533 | coding | downstream | 850440 | 81140223 ~ 81154890 (+) |
| LOC110506818 | NA | coding | downstream | 979261 | 81269044 ~ 81284987 (+) |
| G550306 | NA | non-coding | upstream | 85792 | 80203365 ~ 80203599 (+) |
| G550303 | NA | non-coding | upstream | 105378 | 80183740 ~ 80184013 (+) |
| G550300 | NA | non-coding | upstream | 118767 | 80167706 ~ 80170624 (+) |
| LOC110526764 | fbn1 | non-coding | upstream | 122413 | 80166183 ~ 80317535 (+) |
| G550332 | NA | non-coding | downstream | 8128 | 80297911 ~ 80298518 (+) |
| G550277 | NA | non-coding | downstream | 38329 | 80328112 ~ 80328531 (+) |
| G550335 | NA | non-coding | downstream | 42978 | 80332761 ~ 80332974 (+) |
| G550346 | NA | non-coding | downstream | 74622 | 80364405 ~ 80365182 (+) |
| G550305 | NA | other | upstream | 88862 | 80200170 ~ 80200529 (+) |
| G550265 | NA | other | upstream | 220106 | 80068748 ~ 80069285 (+) |
| LOC118936661 | LOC106592882 | other | upstream | 711401 | 79571838 ~ 79577990 (+) |
| G550054 | NA | other | upstream | 809313 | 79479481 ~ 79480078 (+) |
| LOC110526645 | unc13c | other | upstream | 1126360 | 79089592 ~ 79354959 (+) |
| G551043 | NA | other | downstream | 630924 | 80920707 ~ 80921436 (+) |
| LOC110526107 | scg3 | other | downstream | 1163713 | 81435094 ~ 81466198 (+) |
| LOC110506150 | LOC106562517 | other | downstream | 1555134 | 81815343 ~ 81860498 (+) |
| LOC118964938 | LOC106562620 | other | downstream | 1732268 | 82022011 ~ 82107452 (+) |
