G550726


Basic Information

Item Value
gene id G550726
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 80483965 ~ 80486586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU623614
gagtttgagtttgagtttattttttatttttacagggacagtgcacattaatcaacgtttcagtaaaagtgccggagtccctgggcaggttattaaaaacaattacaatatagacaatagcagcatagaacaagcaagacatagcaacataggacaagcaagacatagcatacagacagagcaacataggacaagcaagacatagcatacagacagagcaacataggacaagcaagacgtagcatacagacagagcaacataaaacaaaaagcagcaagacaaaattcataaaagtaacagagtgtttccacacctcacaagctacagacaacagacaacatggaaagcggcaacacacagctagggaccatgttcacaaatctgattgacctttagccatgtcttcaaacattttgtgaaagtgtgatatgtggtgcagttatgtgtgtctgatggcagtgtattccagacatgggaagctctcacagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU623614 True 491 lncRNA 0.40 3 80483965 80486586

Neighbor

gene id symbol gene type direction distance location
LOC110516752 NA coding upstream 4133 80477819 ~ 80479832 (+)
myef2 myef2 coding upstream 52993 80415414 ~ 80430972 (+)
LOC110506798 NA coding upstream 157584 80324997 ~ 80326381 (+)
LOC110526764 fbn1 coding upstream 166430 80166183 ~ 80317535 (+)
LOC110506794 LOC106596910 coding upstream 336897 80108555 ~ 80147068 (+)
LOC110506811 LOC106562533 coding downstream 653637 81140223 ~ 81154890 (+)
LOC110506818 NA coding downstream 782458 81269044 ~ 81284987 (+)
LOC110526110 LOC106562529 coding downstream 816177 81302763 ~ 81350307 (+)
LOC110526107 scg3 coding downstream 948508 81435094 ~ 81466198 (+)
LOC110506821 LOC106562526 coding downstream 1038221 81524807 ~ 81547341 (+)
G550712 NA non-coding upstream 34411 80438492 ~ 80449554 (+)
G550715 NA non-coding upstream 40563 80442617 ~ 80443402 (+)
G550707 NA non-coding upstream 59429 80423067 ~ 80424536 (+)
G550696 NA non-coding upstream 78518 80404639 ~ 80405447 (+)
G550729 NA non-coding downstream 10471 80497057 ~ 80497719 (+)
G550734 NA non-coding downstream 31919 80518505 ~ 80526713 (+)
G550754 NA non-coding downstream 99828 80586414 ~ 80586771 (+)
G550758 NA non-coding downstream 101797 80588383 ~ 80591331 (+)
G550868 NA non-coding downstream 163548 80650134 ~ 80650493 (+)
G550305 NA other upstream 283436 80200170 ~ 80200529 (+)
G550265 NA other upstream 414680 80068748 ~ 80069285 (+)
LOC118936661 LOC106592882 other upstream 905975 79571838 ~ 79577990 (+)
G550054 NA other upstream 1003887 79479481 ~ 79480078 (+)
G551043 NA other downstream 434121 80920707 ~ 80921436 (+)
LOC110506150 LOC106562517 other downstream 1358331 81815343 ~ 81860498 (+)
LOC118964938 LOC106562620 other downstream 1535465 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 other downstream 1643248 82128769 ~ 82198551 (+)

Expression


Co-expression Network