G550925


Basic Information

Item Value
gene id G550925
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 80727132 ~ 80727333 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU623846
gaaatacaaacatagaacaaaacatagaatgcccaccccaactcacgccctgaccaacctaaaatagagacataaaaaaggaactaaggtcaggacgtgacataaTCAAAATATAAAGTTCATTTATTTGCCAATTTTTCTGCCGTTTTACTTTTTTTGTAAACAGgacgcatgttttggaatattttttattctttacaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU623846 True 202 lncRNA 0.33 1 80727132 80727333

Neighbor

gene id symbol gene type direction distance location
LOC110516752 NA coding upstream 247300 80477819 ~ 80479832 (+)
myef2 myef2 coding upstream 296160 80415414 ~ 80430972 (+)
LOC110506798 NA coding upstream 400751 80324997 ~ 80326381 (+)
LOC110526764 fbn1 coding upstream 409597 80166183 ~ 80317535 (+)
LOC110506794 LOC106596910 coding upstream 580064 80108555 ~ 80147068 (+)
LOC110506811 LOC106562533 coding downstream 412890 81140223 ~ 81154890 (+)
LOC110506818 NA coding downstream 541711 81269044 ~ 81284987 (+)
LOC110526110 LOC106562529 coding downstream 575430 81302763 ~ 81350307 (+)
LOC110526107 scg3 coding downstream 707761 81435094 ~ 81466198 (+)
LOC110506821 LOC106562526 coding downstream 797474 81524807 ~ 81547341 (+)
G550910 NA non-coding upstream 17541 80709352 ~ 80709591 (+)
G550902 NA non-coding upstream 31935 80694648 ~ 80695197 (+)
G550883 NA non-coding upstream 38324 80688513 ~ 80688808 (+)
G550878 NA non-coding upstream 43685 80674998 ~ 80683447 (+)
G550868 NA non-coding upstream 76639 80650134 ~ 80650493 (+)
G550939 NA non-coding downstream 11518 80738851 ~ 80739073 (+)
G550941 NA non-coding downstream 18451 80745784 ~ 80746004 (+)
G550978 NA non-coding downstream 77755 80805088 ~ 80805309 (+)
G550981 NA non-coding downstream 82575 80809908 ~ 80810245 (+)
G550982 NA non-coding downstream 84295 80811628 ~ 80811930 (+)
G550305 NA other upstream 526603 80200170 ~ 80200529 (+)
G550265 NA other upstream 657847 80068748 ~ 80069285 (+)
LOC118936661 LOC106592882 other upstream 1149142 79571838 ~ 79577990 (+)
G550054 NA other upstream 1247054 79479481 ~ 79480078 (+)
G551043 NA other downstream 193374 80920707 ~ 80921436 (+)
LOC110506150 LOC106562517 other downstream 1117584 81815343 ~ 81860498 (+)
LOC118964938 LOC106562620 other downstream 1294718 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 other downstream 1402501 82128769 ~ 82198551 (+)

Expression


Co-expression Network