G551060


Basic Information

Item Value
gene id G551060
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 80936357 ~ 80936655 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU624005
cccagacccagccttatccagacccagccttatccagacccagtcttacccagccttacccagacccagccttatccagacccagccttatccagacccagttttacccagccttacccagacccagccttatccagacccagccttatccagacccagtcttacccagccttacccagacccagccttatccagacccagccttatccagacccagtcttacccagccttacccagacccagccttatccagacccagccttacccagacccagtcttacccagccttatccagaccc

Function

NR:

description
PREDICTED: vegetative cell wall protein gp1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU624005 True 299 lncRNA 0.57 1 80936357 80936655

Neighbor

gene id symbol gene type direction distance location
LOC110516752 NA coding upstream 456525 80477819 ~ 80479832 (+)
myef2 myef2 coding upstream 505385 80415414 ~ 80430972 (+)
LOC110506798 NA coding upstream 609976 80324997 ~ 80326381 (+)
LOC110526764 fbn1 coding upstream 618822 80166183 ~ 80317535 (+)
LOC110506794 LOC106596910 coding upstream 789289 80108555 ~ 80147068 (+)
LOC110506811 LOC106562533 coding downstream 203568 81140223 ~ 81154890 (+)
LOC110506818 NA coding downstream 332389 81269044 ~ 81284987 (+)
LOC110526110 LOC106562529 coding downstream 366108 81302763 ~ 81350307 (+)
LOC110526107 scg3 coding downstream 498439 81435094 ~ 81466198 (+)
LOC110506821 LOC106562526 coding downstream 588152 81524807 ~ 81547341 (+)
G551050 NA non-coding upstream 6889 80929052 ~ 80929468 (+)
G551042 NA non-coding upstream 16334 80919732 ~ 80920023 (+)
G551032 NA non-coding upstream 41579 80894577 ~ 80894778 (+)
G551030 NA non-coding upstream 59703 80875988 ~ 80876654 (+)
G551028 NA non-coding upstream 61081 80875070 ~ 80875276 (+)
G551073 NA non-coding downstream 27165 80963820 ~ 80964364 (+)
G551075 NA non-coding downstream 28596 80965251 ~ 80965465 (+)
G551076 NA non-coding downstream 29000 80965655 ~ 80965862 (+)
G551089 NA non-coding downstream 53165 80989820 ~ 80990043 (+)
G551095 NA non-coding downstream 58775 80995430 ~ 80995676 (+)
G551043 NA other upstream 14921 80920707 ~ 80921436 (+)
G550305 NA other upstream 735828 80200170 ~ 80200529 (+)
G550265 NA other upstream 867072 80068748 ~ 80069285 (+)
LOC118936661 LOC106592882 other upstream 1358367 79571838 ~ 79577990 (+)
LOC110506150 LOC106562517 other downstream 908262 81815343 ~ 81860498 (+)
LOC118964938 LOC106562620 other downstream 1085396 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 other downstream 1193179 82128769 ~ 82198551 (+)
G551805 NA other downstream 1328314 82264969 ~ 82265749 (+)

Expression


Co-expression Network