G551076


Basic Information

Item Value
gene id G551076
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 80965655 ~ 80965862 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU624021
cattccatactgtagattctacaacatagagaagaaacattccatactgtattctagaacatagaggagaaacattccatactgtagattctacaacatagagaagaaacattccatactgtagattctacaacatagagaagaaacattccatactgtagattcttcaacatatataagtaacattccatactgtagattctacaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU624021 True 208 lncRNA 0.32 1 80965655 80965862

Neighbor

gene id symbol gene type direction distance location
LOC110516752 NA coding upstream 485823 80477819 ~ 80479832 (+)
myef2 myef2 coding upstream 534683 80415414 ~ 80430972 (+)
LOC110506798 NA coding upstream 639274 80324997 ~ 80326381 (+)
LOC110526764 fbn1 coding upstream 648120 80166183 ~ 80317535 (+)
LOC110506794 LOC106596910 coding upstream 818587 80108555 ~ 80147068 (+)
LOC110506811 LOC106562533 coding downstream 174361 81140223 ~ 81154890 (+)
LOC110506818 NA coding downstream 303182 81269044 ~ 81284987 (+)
LOC110526110 LOC106562529 coding downstream 336901 81302763 ~ 81350307 (+)
LOC110526107 scg3 coding downstream 469232 81435094 ~ 81466198 (+)
LOC110506821 LOC106562526 coding downstream 558945 81524807 ~ 81547341 (+)
G551075 NA non-coding upstream 190 80965251 ~ 80965465 (+)
G551073 NA non-coding upstream 1291 80963820 ~ 80964364 (+)
G551060 NA non-coding upstream 29000 80936357 ~ 80936655 (+)
G551050 NA non-coding upstream 36187 80929052 ~ 80929468 (+)
G551042 NA non-coding upstream 45632 80919732 ~ 80920023 (+)
G551089 NA non-coding downstream 23958 80989820 ~ 80990043 (+)
G551095 NA non-coding downstream 29568 80995430 ~ 80995676 (+)
G551104 NA non-coding downstream 58747 81024609 ~ 81024840 (+)
G551106 NA non-coding downstream 59469 81025331 ~ 81025617 (+)
G551112 NA non-coding downstream 65953 81031815 ~ 81032022 (+)
G551043 NA other upstream 44219 80920707 ~ 80921436 (+)
G550305 NA other upstream 765126 80200170 ~ 80200529 (+)
G550265 NA other upstream 896370 80068748 ~ 80069285 (+)
LOC118936661 LOC106592882 other upstream 1387665 79571838 ~ 79577990 (+)
LOC110506150 LOC106562517 other downstream 879055 81815343 ~ 81860498 (+)
LOC118964938 LOC106562620 other downstream 1056189 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 other downstream 1163972 82128769 ~ 82198551 (+)
G551805 NA other downstream 1299107 82264969 ~ 82265749 (+)

Expression


Co-expression Network