G551116


Basic Information

Item Value
gene id G551116
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 81040772 ~ 81041056 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU624061
tccccagcgctggttcatccatctgacaggaggaggatgttcgtttccccagcgctggttcatccatctgacaggaggaggatgttggtttccccagcgctggttcatccatctgacaggaggaggatgttagtttccccagcgctggttcatccatctgacaggaggaggatgttggttTCCCCAGTgctggttcatccatctgacaggaggaggatgttggtttccccagcgctggttcatccatctgacaggaggaggatgttagtttccccagcgctggtt

Function

NR:

description
GTPase IMAP family member 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU624061 True 285 lncRNA 0.55 1 81040772 81041056

Neighbor

gene id symbol gene type direction distance location
LOC110516752 NA coding upstream 560940 80477819 ~ 80479832 (+)
myef2 myef2 coding upstream 609800 80415414 ~ 80430972 (+)
LOC110506798 NA coding upstream 714391 80324997 ~ 80326381 (+)
LOC110526764 fbn1 coding upstream 723237 80166183 ~ 80317535 (+)
LOC110506794 LOC106596910 coding upstream 893704 80108555 ~ 80147068 (+)
LOC110506811 LOC106562533 coding downstream 99167 81140223 ~ 81154890 (+)
LOC110506818 NA coding downstream 227988 81269044 ~ 81284987 (+)
LOC110526110 LOC106562529 coding downstream 261707 81302763 ~ 81350307 (+)
LOC110526107 scg3 coding downstream 394038 81435094 ~ 81466198 (+)
LOC110506821 LOC106562526 coding downstream 483751 81524807 ~ 81547341 (+)
G551112 NA non-coding upstream 8750 81031815 ~ 81032022 (+)
G551106 NA non-coding upstream 15155 81025331 ~ 81025617 (+)
G551104 NA non-coding upstream 15932 81024609 ~ 81024840 (+)
G551095 NA non-coding upstream 45096 80995430 ~ 80995676 (+)
G551089 NA non-coding upstream 50729 80989820 ~ 80990043 (+)
G551119 NA non-coding downstream 4011 81045067 ~ 81045518 (+)
G551131 NA non-coding downstream 14074 81055130 ~ 81055384 (+)
G551141 NA non-coding downstream 28014 81069070 ~ 81069283 (+)
G551143 NA non-coding downstream 32415 81073471 ~ 81074192 (+)
G551145 NA non-coding downstream 43713 81084769 ~ 81085093 (+)
G551043 NA other upstream 119336 80920707 ~ 80921436 (+)
G550305 NA other upstream 840243 80200170 ~ 80200529 (+)
G550265 NA other upstream 971487 80068748 ~ 80069285 (+)
LOC118936661 LOC106592882 other upstream 1462782 79571838 ~ 79577990 (+)
LOC110506150 LOC106562517 other downstream 803861 81815343 ~ 81860498 (+)
LOC118964938 LOC106562620 other downstream 980995 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 other downstream 1088778 82128769 ~ 82198551 (+)
G551805 NA other downstream 1223913 82264969 ~ 82265749 (+)

Expression


Co-expression Network